chr3 : 24,401,684 24,402,047
363 bp 60 TFs 0 linked genes
This 363 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:24,396,684 – 24,407,047
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 193 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 113 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 67 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 135 bp overlap
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 154 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 142 bp overlap
CDK8 1 dataset
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 81 bp overlap
CDX2 2 datasets
ChIP LS180_125 GSE31939.CDX2.LS180_125 107 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 146 bp overlap
CTCF 5 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 151 bp overlap
ChIP skin ENCSR485VQV.CTCF.skin 138 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 102 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 120 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 96 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 304 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 126 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 136 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 136 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 83 bp overlap
MED1 1 dataset
ChIP VCaP GSE148358.MED1.VCaP 199 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 112 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 52 bp overlap
Mecom 1 dataset
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 151 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 266 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 148 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 296 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 57 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 154 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 363 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 75 bp overlap
SPI1 11 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 161 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 161 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 261 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 159 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 118 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPI1.OCI-Ly3_SHCTR 184 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 199 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 246 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 84 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 151 bp overlap
SPIB 2 datasets
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 215 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 294 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 250 bp overlap
STAT3 1 dataset
ChIP BT-474 GSE152203.STAT3.BT-474 187 bp overlap
TCF12 2 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 115 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TCF7L2 1 dataset
ChIP Panc1 ENCFF829HHL 51 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 77 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 204 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 97 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 254 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 352 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 148 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 191 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 170 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 106 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 363 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 363 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZFP64 2 datasets
ChIP HEK293 GSE76494.ZFP64.HEK293 180 bp overlap
ChIP HEK293 GSE76494.ZFP64.HEK293 85 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 117 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 190 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 89 bp overlap
ZNF350 3 datasets
ChIP HEK293 ENCFF428BAO 137 bp overlap
ChIP HEK293 ENCSR854ORP.ZNF350.HEK293 122 bp overlap
ChIP HEK293 GSE76494.ZNF350.HEK293 129 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 270 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 60 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 86 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 71 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap