chr2 : 181,047,697 – 181,048,622
925 bp 79 TFs 0 linked genes
This 925 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:181,042,697 – 181,053,622
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
Arid5a 1 dataset
Motif DE_12h DE_12h-Arid5a_MA0602.2 8 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 215 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 115 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 340 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
DPRX 2 datasets
Motif DE_12h DE_12h-DPRX_MA1480.2 9 bp overlap
Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 248 bp overlap
ERF::HOXB13 2 datasets
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
ESR1 1 dataset
ChIP MCF-7 ERP000209.ESR1.MCF-7 182 bp overlap
ETV2::DRGX 1 dataset
Motif DE_12h DE_12h-ETV2DRGX_MA1940.2 12 bp overlap
ETV5::DRGX 1 dataset
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
FLI1::DRGX 1 dataset
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
FOXA1 2 datasets
ChIP ZR751 GSE72249.FOXA1.ZR751 410 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 384 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 193 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 193 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 271 bp overlap
GATA3 3 datasets
ChIP MCF-7 ENCFF352QVM 481 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 326 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 205 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 391 bp overlap
ChIP DE DE-GATA4-2 518 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 336 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 370 bp overlap
ChIP DE DE-GATA6-2 545 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 920 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 749 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 743 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 646 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 888 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 908 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 433 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 216 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD12::ELK1 1 dataset
Motif DE_12h DE_12h-HOXD12ELK1_MA1958.2 13 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Hmga1 2 datasets
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
Motif DE_36h DE_36h-Hmga1_MA2124.1 8 bp overlap
Hnf1A 2 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 276 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Irf1 2 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
JUN 6 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 710 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 735 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 329 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 904 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 147 bp overlap
LIN54 2 datasets
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 431 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 345 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 94 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 240 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
Plagl1 2 datasets
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
Motif DE_36h DE_36h-Plagl1_MA1615.2 8 bp overlap
RBPJ 3 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 336 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 563 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 472 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 452 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 357 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 245 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 415 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 198 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 188 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif DE_36h DE_36h-SP8_MA0747.2 11 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Sox17 3 datasets
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 209 bp overlap
TCF7L2 8 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
ChIP HEK293 ENCFF513JQN 505 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 341 bp overlap
ChIP MCF-7 ENCFF219LIX 491 bp overlap
ChIP MCF-7 ENCSR000EWT.TCF7L2.MCF-7 384 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 340 bp overlap
ChIP Panc1 ENCFF829HHL 591 bp overlap
TFAP2A 6 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_36h DE_36h-TFAP2A_MA0810.2 11 bp overlap
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 255 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 162 bp overlap
TFAP2B 5 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_36h DE_36h-TFAP2B_MA0812.2 9 bp overlap
ChIP SK-N-SH ENCFF869XXQ 142 bp overlap
TFAP2C 8 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_36h DE_36h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 242 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 207 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 677 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 515 bp overlap
TFAP2E 2 datasets
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
Motif DE_36h DE_36h-TFAP2E_MA1569.2 9 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 290 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
ZNF184 2 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
ZNF189 3 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ChIP HEK293 ENCFF638TIB 207 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 386 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 245 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
ZNF454 2 datasets
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Motif DE_36h DE_36h-ZNF454_MA1712.2 17 bp overlap
ZNF485 1 dataset
ChIP HEK293T GSE78099.ZNF485.HEK293T 309 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF582 4 datasets
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZNF766 2 datasets
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Motif DE_36h DE_36h-ZNF766_MA2098.1 9 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
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