chr2 : 177,684,494 – 177,685,277

783 bp 94 TFs 0 linked genes

This 783 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

94 transcription factors

ASCL1 2 datasets

Motif DE_36h DE_36h-ASCL1_MA1100.3 8 bp overlap

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 252 bp overlap

Ascl2 1 dataset

Motif DE_36h DE_36h-Ascl2_MA0816.1 10 bp overlap

Atoh1 1 dataset

Motif DE_36h DE_36h-Atoh1_MA1467.3 7 bp overlap

BHLHE22 1 dataset

Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap

BRD9 1 dataset

ChIP G-401 GSE120234.BRD9.G-401 473 bp overlap

Bhlha15 1 dataset

Motif DE_36h DE_36h-Bhlha15_MA1472.3 8 bp overlap

CEBPB 2 datasets

ChIP K562 ENCFF584CTB 525 bp overlap

ChIP K562 ENCFF584CTB 367 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 198 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 316 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 349 bp overlap

CTCF 1 dataset

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 238 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF093OYK 252 bp overlap

Crx 1 dataset

Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap

DPRX 1 dataset

Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap

DUX4 2 datasets

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 187 bp overlap

Dmbx1 1 dataset

Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 238 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 311 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 206 bp overlap

FERD3L 1 dataset

Motif DE_36h DE_36h-FERD3L_MA1485.1 14 bp overlap

FOXA1 11 datasets

ChIP HepG2 ENCFF207NVJ 131 bp overlap

ChIP HepG2 ENCFF740VZW 155 bp overlap

ChIP MCF-7 ERP001226.FOXA1.MCF-7 101 bp overlap

ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 171 bp overlap

ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 139 bp overlap

ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 112 bp overlap

ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 104 bp overlap

ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 173 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 146 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 158 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 587 bp overlap

FOXA2 7 datasets

ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 118 bp overlap

ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 225 bp overlap

ChIP DE DE-FOXA2-1 714 bp overlap

ChIP DE DE-FOXA2-2 712 bp overlap

ChIP HepG2 ENCFF533COJ 137 bp overlap

ChIP HepG2 ENCFF570ABM 209 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 393 bp overlap

FOXD2 1 dataset

Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap

GATA2 1 dataset

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 739 bp overlap

ChIP DE DE-GATA4-2 783 bp overlap

ChIP foregut GSE117136.GATA4.foregut 691 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 736 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 654 bp overlap

GATA6 14 datasets

ChIP AGS GSE51705.GATA6.AGS 160 bp overlap

ChIP DE DE-GATA6-1 700 bp overlap

ChIP DE DE-GATA6-2 783 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 685 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 709 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 470 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 722 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 783 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 783 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 305 bp overlap

ChIP foregut GSE117136.GATA6.foregut 745 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 682 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 275 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 652 bp overlap

GFI1 1 dataset

Motif DE_36h DE_36h-GFI1_MA0038.3 11 bp overlap

GSC 1 dataset

Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap

Gfi1B 1 dataset

Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap

HAND2 1 dataset

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

HMBOX1 1 dataset

Motif DE_36h DE_36h-HMBOX1_MA0895.2 7 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 277 bp overlap

KDM1A 3 datasets

ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 338 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 783 bp overlap

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 752 bp overlap

MECOM 1 dataset

ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 151 bp overlap

MEF2D 1 dataset

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 293 bp overlap

MEIS2 1 dataset

ChIP K-562 ENCSR851BNE.MEIS2.K-562 218 bp overlap

MSANTD3 1 dataset

Motif DE_36h DE_36h-MSANTD3_MA1523.2 7 bp overlap

MSC 1 dataset

Motif DE_36h DE_36h-MSC_MA0665.1 10 bp overlap

MYF5 1 dataset

Motif DE_36h DE_36h-MYF5_MA1641.2 8 bp overlap

MYF6 1 dataset

Motif DE_36h DE_36h-MYF6_MA0667.1 10 bp overlap

MYOD1 1 dataset

Motif DE_36h DE_36h-MYOD1_MA0499.3 9 bp overlap

MYOG 1 dataset

Motif DE_36h DE_36h-MYOG_MA0500.3 8 bp overlap

Msgn1 1 dataset

Motif DE_36h DE_36h-Msgn1_MA1524.3 10 bp overlap

NEUROD1 2 datasets

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 214 bp overlap

Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif DE_36h DE_36h-NEUROG2_MA1642.2 7 bp overlap

NHLH1 1 dataset

Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap

NKX2-2 1 dataset

Motif DE_36h DE_36h-NKX2-2_MA1645.2 8 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BHF.NR3C1.A-549 129 bp overlap

Neurod2 2 datasets

Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap

Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap

Nr5A2 1 dataset

Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap

ONECUT1 2 datasets

ChIP H9 ERP004206.ONECUT1.H9 230 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 336 bp overlap

ONECUT2 1 dataset

ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 242 bp overlap

OTX1 1 dataset

Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 409 bp overlap

Olig2 1 dataset

Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap

PBX3 1 dataset

Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap

PDX1 2 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap

ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 339 bp overlap

PHOX2A 1 dataset

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap

PITX1 1 dataset

Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap

PKNOX1 1 dataset

Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 285 bp overlap

PROP1 1 dataset

Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 299 bp overlap

Ptf1A 2 datasets

Motif DE_36h DE_36h-Ptf1A_MA1618.2 9 bp overlap

Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap

RHOXF1 1 dataset

Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap

RORA 1 dataset

Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap

RORB 2 datasets

Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 259 bp overlap

RORC 1 dataset

Motif DE_36h DE_36h-RORC_MA1151.2 10 bp overlap

Rhox11 1 dataset

Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 751 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 514 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 285 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 428 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

SMARCA4 2 datasets

ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 371 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 783 bp overlap

SMARCC1 3 datasets

ChIP G-401_NoDox GSE71504.SMARCC1.G-401_NoDox 187 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 783 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 783 bp overlap

SOX13 1 dataset

ChIP HepG2 ENCFF062VSQ 127 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 206 bp overlap

SS18 1 dataset

ChIP SYO-1 GSE108025.SS18.SYO-1 461 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 216 bp overlap

TAL1::TCF3 1 dataset

Motif DE_36h DE_36h-TAL1TCF3_MA0091.2 10 bp overlap

TFAP4 1 dataset

Motif DE_36h DE_36h-TFAP4_MA0691.1 10 bp overlap

Tcf12 1 dataset

Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap

Tcf21 1 dataset

Motif DE_36h DE_36h-Tcf21_MA0832.2 10 bp overlap

Twist2 1 dataset

Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap

ZBTB18 1 dataset

Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap

ZBTB6 1 dataset

Motif DE_36h DE_36h-ZBTB6_MA1581.2 9 bp overlap

ZKSCAN1 1 dataset

Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap

ZNF140 1 dataset

Motif DE_36h DE_36h-ZNF140_MA1589.2 19 bp overlap

ZNF3 1 dataset

ChIP K562 ENCFF410DHO 298 bp overlap

ZNF549 1 dataset

Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap

ZNF664 2 datasets

ChIP HEK293 ENCFF343XSW 323 bp overlap

ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 250 bp overlap

ZNF677 1 dataset

Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap

Zfp809 1 dataset

Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap

Zic2 1 dataset

Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap