chr2 : 163,469,551 163,469,939
388 bp 60 TFs 0 linked genes
This 388 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:163,464,551 – 163,474,939
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 1 dataset
ChIP epididymis_HEE_R1881 GSE109061.AR.epididymis_HEE_R1881 174 bp overlap
BCL6 1 dataset
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
BRD4 6 datasets
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 276 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 388 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 196 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 179 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 380 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 241 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 296 bp overlap
CEBPA 7 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 136 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 157 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 198 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 142 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 201 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 97 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 139 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 139 bp overlap
CTCF 28 datasets
ChIP D721Med ENCFF513FYD 196 bp overlap
ChIP GM23338 ENCFF772DML 181 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 236 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 173 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 156 bp overlap
ChIP Panc1 ENCFF056JQX 388 bp overlap
ChIP ascending aorta ENCFF451CCT 320 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 260 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 259 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 245 bp overlap
ChIP chondrocyte ENCFF134ORZ 388 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 236 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 158 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 163 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 132 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 129 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 271 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 160 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 163 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 307 bp overlap
ChIP heart left ventricle ENCFF354HOQ 309 bp overlap
ChIP heart right ventricle ENCFF027ORH 346 bp overlap
ChIP heart right ventricle ENCFF979TCT 365 bp overlap
ChIP heart right ventricle ENCFF979TCT 166 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 149 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 137 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 164 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 226 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 293 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 237 bp overlap
FLI1 1 dataset
ChIP NB4 GSE23730.FLI1.NB4 158 bp overlap
GFI1 1 dataset
ChIP NB4 GSE128528.GFI1.NB4 216 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 149 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 238 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 388 bp overlap
HOXB4 2 datasets
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
JMJD1C 1 dataset
ChIP NB4 GSE63484.JMJD1C.NB4 102 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 388 bp overlap
KLF5 2 datasets
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 164 bp overlap
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 118 bp overlap
LIN54 2 datasets
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 193 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
MAX 1 dataset
ChIP NB4 ENCFF966MWB 145 bp overlap
MED1 4 datasets
ChIP MOLM-14_DHE GSE124963.MED1.MOLM-14_DHE 163 bp overlap
ChIP MOLM-14_Veh GSE124963.MED1.MOLM-14_Veh 195 bp overlap
ChIP SGBS GSE64233.MED1.SGBS 388 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 388 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 197 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 388 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 235 bp overlap
NFIA 2 datasets
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
NFIB 1 dataset
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
NFIC 2 datasets
Motif DE_12h DE_12h-NFIC_MA0161.3 7 bp overlap
Motif DE_36h DE_36h-NFIC_MA0161.3 7 bp overlap
NFIX 2 datasets
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
NR4A1 1 dataset
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 119 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 388 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 232 bp overlap
PPARG 1 dataset
ChIP SGBS GSE41629.PPARG.SGBS 230 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 228 bp overlap
ChIP H1 ENCFF967OJF 220 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 188 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 388 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 120 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 173 bp overlap
SIX1 2 datasets
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
Motif DE_36h DE_36h-SIX1_MA1118.2 9 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 212 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 388 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 388 bp overlap
SOX2 2 datasets
ChIP RENVM GSE49404.SOX2.RENVM 210 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 270 bp overlap
STAG1 1 dataset
ChIP MCF-7 ERP000209.STAG1.MCF-7 179 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 258 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 326 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 143 bp overlap
Six4 2 datasets
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
Motif DE_36h DE_36h-Six4_MA2001.2 7 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
TRIM24 2 datasets
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 333 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 169 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 145 bp overlap
ZNF667 2 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap