chr2 : 103,120,976 103,121,644
668 bp 109 TFs 0 linked genes
This 668 bp open chromatin element has no linked target genes and is bound by 109 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:103,115,976 – 103,126,644
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
ARGFX 1 dataset
Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap
DRGX 1 dataset
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
EMX1 1 dataset
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap
EOMES 3 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 562 bp overlap
ESX1 1 dataset
Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 482 bp overlap
EVX1 1 dataset
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 668 bp overlap
ChIP DE DE-FOXA2-2 668 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 668 bp overlap
ChIP DE DE-GATA4-2 668 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 631 bp overlap
ChIP DE DE-GATA6-2 668 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 571 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 599 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 668 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 668 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 668 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 668 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 560 bp overlap
GBX1 1 dataset
Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
GSX1 1 dataset
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap
HOXA1 1 dataset
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
HOXB1 1 dataset
Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
HOXC8 1 dataset
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
ISX 1 dataset
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 543 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 408 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 569 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 543 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 599 bp overlap
LBX1 1 dataset
Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap
LMX1A 1 dataset
Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap
Lhx1 1 dataset
Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
MAFF 1 dataset
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEOX1 1 dataset
Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap
MGA 2 datasets
Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
MGA::EVX1 2 datasets
Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
MIXL1 1 dataset
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
Mafb 1 dataset
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 265 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 172 bp overlap
NKX6-2 1 dataset
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
NKX6-3 2 datasets
Motif DE_36h DE_36h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_48h DE_48h-NKX6-3_MA1530.2 8 bp overlap
NOTO 1 dataset
Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap
NRL 1 dataset
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
PDX1 1 dataset
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
PGR 1 dataset
Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap
PLAG1 2 datasets
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
Motif DE_48h DE_48h-PLAG1_MA0163.1 14 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 361 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 280 bp overlap
POU6F1 1 dataset
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap
PRDM9 2 datasets
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
PRRX1 1 dataset
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap
RARA 2 datasets
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap
RAX2 1 dataset
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 132 bp overlap
SATB1 1 dataset
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 175 bp overlap
SHOX 1 dataset
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 380 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 283 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 244 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 408 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 383 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 434 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 480 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 567 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 463 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 640 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 208 bp overlap
SOX10 1 dataset
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 515 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 372 bp overlap
SOX21 2 datasets
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
Motif DE_36h DE_36h-SOX21_MA0866.1 15 bp overlap
SP5 2 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
SPDEF 1 dataset
Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap
SPIB 1 dataset
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 155 bp overlap
Shox2 1 dataset
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 343 bp overlap
TBR1 2 datasets
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
TBX1 3 datasets
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 3 datasets
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX18 3 datasets
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX19 2 datasets
Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap
Motif DE_48h DE_48h-TBX19_MA0804.2 17 bp overlap
TBX2 3 datasets
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
TBX20 2 datasets
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
TBX21 3 datasets
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
TBX3 3 datasets
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
TBX4 3 datasets
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
TBX5 3 datasets
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
TBXT 2 datasets
Motif DE_36h DE_36h-TBXT_MA0009.2 16 bp overlap
Motif DE_48h DE_48h-TBXT_MA0009.2 16 bp overlap
TLX2 1 dataset
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 168 bp overlap
Tbx6 2 datasets
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
UNCX 1 dataset
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
mix-a 1 dataset
Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap