chr2 : 49,044,574 – 49,044,975
401 bp 86 TFs 0 linked genes
This 401 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:49,039,574 – 49,049,975
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
ARGFX 3 datasets
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
Motif DE_24h DE_24h-ARGFX_MA1463.2 8 bp overlap
Motif ES_0h ES_0h-ARGFX_MA1463.2 8 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 230 bp overlap
Arx 3 datasets
Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap
Motif DE_24h DE_24h-Arx_MA0874.2 10 bp overlap
Motif ES_0h ES_0h-Arx_MA0874.2 10 bp overlap
BARX1 3 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
BRD4 3 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 361 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 200 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 319 bp overlap
BSX 3 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
Bhlha15 1 dataset
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
CTCF 293 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 310 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 298 bp overlap
ChIP A673 ENCFF123WOM 176 bp overlap
ChIP A673 ENCFF123WOM 139 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 300 bp overlap
ChIP BE2C ENCFF757SRF 99 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 289 bp overlap
ChIP Caco-2 ENCFF753NZV 273 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 187 bp overlap
ChIP D721Med ENCFF513FYD 211 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 158 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 189 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 196 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 228 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 331 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 303 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 162 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 185 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 237 bp overlap
ChIP GM10248 ENCFF083HVS 165 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 142 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 167 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 201 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 144 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 103 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 218 bp overlap
ChIP GM12872 ENCFF697BYI 270 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 190 bp overlap
ChIP GM12874 ENCFF942MTD 261 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 108 bp overlap
ChIP GM12875 ENCFF081UCQ 219 bp overlap
ChIP GM12878 ENCFF635MMB 217 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 141 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 252 bp overlap
ChIP GM23338 ENCFF531QOI 241 bp overlap
ChIP GM23338 ENCFF772DML 148 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 401 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 286 bp overlap
ChIP H1 ENCFF414GZI 209 bp overlap
ChIP H1 ENCFF764RHO 163 bp overlap
ChIP H9 ENCFF152GTF 277 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 284 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 230 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 255 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 287 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 313 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 217 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 277 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 277 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 290 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 286 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 287 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 281 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 132 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 208 bp overlap
ChIP HEK293 ENCFF498RMM 250 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 203 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 147 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 128 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 212 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 244 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 178 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 178 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 192 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 182 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 140 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 201 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 206 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 170 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 137 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 124 bp overlap
ChIP HepG2 ENCFF127KUP 220 bp overlap
ChIP HepG2 ENCFF194VBQ 262 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 335 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 184 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 103 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 132 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 118 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 99 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 239 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 226 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 240 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 174 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 166 bp overlap
ChIP Loucy ENCFF359TVQ 347 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 252 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 401 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 237 bp overlap
ChIP MCF-7 ENCFF139NQI 230 bp overlap
ChIP MCF-7 ENCFF162GNE 232 bp overlap
ChIP MCF-7 ENCFF198DQX 111 bp overlap
ChIP MCF-7 ENCFF210JUZ 145 bp overlap
ChIP MCF-7 ENCFF494VXA 111 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 315 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 306 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 180 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 172 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 181 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 179 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 253 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 237 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 258 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 187 bp overlap
ChIP MM.1S ENCFF869JMQ 310 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 244 bp overlap
ChIP NB4 ENCFF155DNY 192 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 185 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 240 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 158 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 401 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 251 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 190 bp overlap
ChIP Peyer's patch ENCFF701KWW 326 bp overlap
ChIP Peyer's patch ENCFF746TCR 317 bp overlap
ChIP Peyer's patch ENCFF828IDE 295 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 258 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 228 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 204 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 217 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 244 bp overlap
ChIP RWPE2 ENCFF911IEE 401 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 217 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 102 bp overlap
ChIP SK-N-SH ENCFF731NJX 245 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 208 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 188 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 161 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 118 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 374 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 162 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 148 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 155 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 161 bp overlap
ChIP UPCI-SCC-090 GSE143026.CTCF.UPCI-SCC-090 142 bp overlap
ChIP VCaP ENCFF858YQT 197 bp overlap
ChIP VCaP ENCFF858YQT 241 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 325 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 166 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 200 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 191 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 168 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 196 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 84 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 238 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 142 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 188 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 298 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 96 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 267 bp overlap
ChIP brain ENCFF163BBN 244 bp overlap
ChIP brain ENCFF685VRG 401 bp overlap
ChIP brain ENCFF685VRG 217 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 268 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 311 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 154 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 285 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 263 bp overlap
ChIP chondrocyte ENCFF134ORZ 205 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 308 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 312 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 401 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 284 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF255MAF 328 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 361 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 347 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 358 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 314 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF457ZGY 218 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 340 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 337 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 323 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF749FBO 346 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 369 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 356 bp overlap
ChIP endodermal cell ENCFF471YCZ 287 bp overlap
ChIP endodermal cell ENCFF471YCZ 150 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 218 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 217 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 202 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 401 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 208 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 332 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 305 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 292 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 262 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 149 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 90 bp overlap
ChIP gastroesophageal sphincter ENCFF582GAX 291 bp overlap
ChIP gastroesophageal sphincter ENCFF607YRA 342 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 364 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 305 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 222 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 209 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 301 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 238 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 401 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 218 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 327 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 215 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 339 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 313 bp overlap
ChIP heart ENCSR565HBN.CTCF.heart 301 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 223 bp overlap
ChIP heart ENCSR401KRN.CTCF.heart 152 bp overlap
ChIP heart left ventricle ENCFF185CKY 304 bp overlap
ChIP heart left ventricle ENCFF244ZHV 287 bp overlap
ChIP heart left ventricle ENCFF354HOQ 209 bp overlap
ChIP heart left ventricle ENCFF440XFJ 315 bp overlap
ChIP heart left ventricle ENCFF548XHH 299 bp overlap
ChIP heart left ventricle ENCFF575JEQ 330 bp overlap
ChIP heart left ventricle ENCFF663LEI 332 bp overlap
ChIP heart left ventricle ENCFF769GAB 356 bp overlap
ChIP heart left ventricle ENCFF888ERQ 330 bp overlap
ChIP heart left ventricle ENCFF987PUT 272 bp overlap
ChIP heart right ventricle ENCFF022KFI 353 bp overlap
ChIP heart right ventricle ENCFF027ORH 236 bp overlap
ChIP heart right ventricle ENCFF435TKW 253 bp overlap
ChIP heart right ventricle ENCFF577TID 305 bp overlap
ChIP heart right ventricle ENCFF725NNJ 340 bp overlap
ChIP heart right ventricle ENCFF741WMU 358 bp overlap
ChIP heart right ventricle ENCFF767XJQ 352 bp overlap
ChIP heart right ventricle ENCFF979TCT 330 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 274 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 265 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 253 bp overlap
ChIP hepatocyte ENCFF263BLJ 300 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 267 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 186 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 271 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 165 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 160 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 183 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 204 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 122 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 205 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 221 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 154 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 178 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 186 bp overlap
ChIP islet ERP004003.CTCF.islet 239 bp overlap
ChIP islet GSE23784.CTCF.islet 191 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 166 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 129 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 259 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 268 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 254 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 251 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 239 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 193 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 213 bp overlap
ChIP myotube ENCFF981UHL 318 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 270 bp overlap
ChIP nephron ENCFF411ACD 356 bp overlap
ChIP nephron ENCFF589HXU 367 bp overlap
ChIP nephron ENCFF972IQB 263 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 332 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 366 bp overlap
ChIP neural cell ENCFF335ADI 267 bp overlap
ChIP neural crest cell ENCFF182LWK 344 bp overlap
ChIP neural progenitor cell ENCFF420RBO 279 bp overlap
ChIP neural progenitor cell ENCFF581WPG 222 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 326 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 275 bp overlap
ChIP neuron GSE115407.CTCF.neuron 318 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 231 bp overlap
ChIP osteoblast ENCFF491ZJZ 327 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 180 bp overlap
ChIP osteocyte ENCFF929FPD 325 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 112 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 314 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 188 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 240 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 165 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 233 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 280 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 270 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 323 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 269 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 256 bp overlap
ChIP right atrium auricular region ENCFF471FFM 288 bp overlap
ChIP right atrium auricular region ENCFF696NTN 383 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 249 bp overlap
ChIP smooth muscle cell ENCFF656FBT 261 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 275 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 198 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 252 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 221 bp overlap
DLX1 3 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 3 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx2 3 datasets
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Motif DE_24h DE_24h-Dlx2_MA0885.3 8 bp overlap
Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap
Dlx3 3 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 3 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dlx5 3 datasets
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
Motif DE_24h DE_24h-Dlx5_MA1476.3 8 bp overlap
Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 383 bp overlap
ESR1 8 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 171 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 197 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 178 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 188 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 173 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 183 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 172 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 169 bp overlap
ETV2::FIGLA 2 datasets
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif ES_0h ES_0h-ETV2FIGLA_MA1941.2 13 bp overlap
GBX2 3 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
HAND2 3 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HESX1 3 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 318 bp overlap
HOXA7 3 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
LBX2 3 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 3 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MSX1 3 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 3 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
MYB 2 datasets
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYF5 1 dataset
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
MYF6 2 datasets
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
Motif ES_0h ES_0h-MYF6_MA0667.1 10 bp overlap
Msx3 3 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 3 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 115 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 243 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NEUROD1 1 dataset
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 174 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 263 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 69 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Nobox 3 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 202 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 52 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 350 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 190 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
PPARA::RXRA 1 dataset
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
Pparg::Rxra 2 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Prdm4 3 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
RAD21 32 datasets
ChIP GP5D GSE51234.RAD21.GP5D 353 bp overlap
ChIP H1 ENCFF698EWO 169 bp overlap
ChIP H1 ENCFF967OJF 118 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 369 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 313 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 348 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 282 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 171 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 107 bp overlap
ChIP HepG2 ENCFF906QIS 220 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 174 bp overlap
ChIP MCF-7 ENCFF694KOM 287 bp overlap
ChIP MCF-7 ENCFF724VCQ 221 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 222 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 217 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 213 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 182 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 149 bp overlap
ChIP SK-N-SH ENCFF747MAS 221 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 240 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 194 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 237 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 205 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 127 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 208 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 192 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 191 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 156 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 210 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 219 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 342 bp overlap
ChIP neural cell ENCFF564MOT 264 bp overlap
RAX 3 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 101 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 156 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 187 bp overlap
SMC1 2 datasets
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 338 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 228 bp overlap
SMC1A 3 datasets
ChIP A-549 GSE76893.SMC1A.A-549 162 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 215 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 186 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 137 bp overlap
SMC3 7 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 313 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 160 bp overlap
ChIP SK-N-SH ENCFF791WFB 241 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 159 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 336 bp overlap
ChIP neural cell ENCFF795YGY 193 bp overlap
ChIP neural cell ENCFF795YGY 103 bp overlap
SOX13 2 datasets
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX2 3 datasets
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 227 bp overlap
SRF 1 dataset
ChIP MCF-7 ENCSR000BVA.SRF.MCF-7 170 bp overlap
STAG1 8 datasets
ChIP CHRF28811 ERP008568.STAG1.CHRF28811 151 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 189 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 189 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 207 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 185 bp overlap
ChIP HepG2 ENCFF843EBZ 266 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 220 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 140 bp overlap
STAG2 1 dataset
ChIP HL-60 GSE131577.STAG2.HL-60 91 bp overlap
Sox3 2 datasets
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TFAP4::FLI1 2 datasets
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif ES_0h ES_0h-TFAP4FLI1_MA1967.2 14 bp overlap
TWIST1 3 datasets
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Motif DE_24h DE_24h-TWIST1_MA1123.3 8 bp overlap
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tcf21 2 datasets
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 156 bp overlap
ZBTB18 1 dataset
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 133 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF416 3 datasets
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
Motif DE_24h DE_24h-ZNF416_MA1979.2 10 bp overlap
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
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