chr2 : 31,981,143 31,981,327
184 bp 62 TFs 0 linked genes
This 184 bp open chromatin element has no linked target genes and is bound by 62 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:31,976,143 – 31,986,327
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 163 bp overlap
ATF1 2 datasets
ChIP HepG2 ENCFF239LTQ 184 bp overlap
ChIP K-562 ENCSR091GVJ.ATF1.K-562 184 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 105 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 184 bp overlap
BCLAF1 1 dataset
ChIP K562 ENCFF936NCS 184 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 140 bp overlap
BRD4 1 dataset
ChIP HEK293T GSE51633.BRD4.HEK293T 128 bp overlap
BRD9 2 datasets
ChIP K-562 ENCSR177XCS.BRD9.K-562 184 bp overlap
ChIP K562 ENCFF480JXZ 184 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 184 bp overlap
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 184 bp overlap
CTCF 107 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 159 bp overlap
ChIP B cell ENCFF506FKC 184 bp overlap
ChIP B cell ENCFF506FKC 131 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 184 bp overlap
ChIP CUTLL1 GSE115893.CTCF.CUTLL1 173 bp overlap
ChIP CUTLL1_DMSO GSE130140.CTCF.CUTLL1_DMSO 149 bp overlap
ChIP CUTLL1_GSI GSE130140.CTCF.CUTLL1_GSI 166 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 141 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 143 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 184 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 184 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 184 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 155 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 147 bp overlap
ChIP GM12864 ENCFF357DQE 184 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 184 bp overlap
ChIP GM12865 ENCFF067GFI 184 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 123 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 158 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 167 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 159 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 163 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 184 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 184 bp overlap
ChIP GM12872 ENCFF697BYI 184 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 144 bp overlap
ChIP GM12873 ENCFF711LOS 184 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 184 bp overlap
ChIP GM12874 ENCFF942MTD 184 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 164 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 129 bp overlap
ChIP GM12878 ENCFF217EAX 184 bp overlap
ChIP GM12878 ENCFF217EAX 86 bp overlap
ChIP H9 ENCFF152GTF 184 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 152 bp overlap
ChIP HCT116 ENCFF003KHP 184 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 159 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 122 bp overlap
ChIP HL-60 ERP008568.CTCF.HL-60 183 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 163 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 100 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 184 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 167 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 184 bp overlap
ChIP IMR-90_siRNA GSE125639.CTCF.IMR-90_siRNA 126 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 184 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 136 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 184 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 126 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 160 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 123 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 117 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 115 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 125 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 162 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 132 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 161 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 92 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 184 bp overlap
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 120 bp overlap
ChIP Kasumi-1_siRE GSE121280.CTCF.Kasumi-1_siRE 140 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 184 bp overlap
ChIP Loucy ENCFF359TVQ 184 bp overlap
ChIP Loucy ENCFF359TVQ 161 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 184 bp overlap
ChIP MCF-7 ENCFF139NQI 171 bp overlap
ChIP Peyer's patch ENCFF828IDE 184 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 184 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 184 bp overlap
ChIP T-cell GSE115893.CTCF.T-cell 184 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 122 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 184 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 131 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 184 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 184 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 184 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 184 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 184 bp overlap
ChIP endodermal cell ENCFF471YCZ 184 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 143 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 184 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 184 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 184 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 167 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 154 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 171 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 150 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 177 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 81 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 133 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 175 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
ChIP keratinocyte ENCFF805QIE 184 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 150 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 184 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 184 bp overlap
ChIP neural crest cell ENCFF182LWK 184 bp overlap
ChIP neural crest cell ENCFF182LWK 130 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 170 bp overlap
ChIP spleen ENCFF878IYR 184 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 111 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 184 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 184 bp overlap
ChIP spleen ENCSR028YEV.CTCF.spleen 184 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 184 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 184 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 184 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 91 bp overlap
DUX4 1 dataset
ChIP HEK293 GSE75791.DUX4.HEK293 184 bp overlap
E2F1 1 dataset
ChIP K562 ENCFF191BFW 184 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 184 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 122 bp overlap
ELF1 2 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 95 bp overlap
ChIP K562 ENCFF886KFV 104 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 125 bp overlap
ERG 2 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 149 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 158 bp overlap
ESR1 1 dataset
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 56 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 156 bp overlap
EVI1 2 datasets
ChIP SKH1 GSE87283.EVI1.SKH1 177 bp overlap
ChIP SKH1_10d GSE87283.EVI1.SKH1_10d 99 bp overlap
FOXA1 1 dataset
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 184 bp overlap
GATA2 1 dataset
ChIP SKH1 GSE87283.GATA2.SKH1 184 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HDAC2 1 dataset
ChIP K-562 GSE140325.HDAC2.K-562 141 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 69 bp overlap
HMBOX1 4 datasets
ChIP HeLa GSE46237.HMBOX1.HeLa 148 bp overlap
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 184 bp overlap
ChIP K562 ENCFF055GAZ 184 bp overlap
ChIP K562 ENCFF317JJX 184 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 184 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 136 bp overlap
MAX 2 datasets
ChIP P493-6 GSE36354.MAX.P493-6 92 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 184 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 184 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 177 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 118 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 184 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 184 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 170 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 184 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 184 bp overlap
ChIP hESC GSE18292.NANOG.hESC 100 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 80 bp overlap
ChIP GM12878 ENCFF213ZNN 184 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 184 bp overlap
PKNOX1 3 datasets
ChIP GM12878 ENCFF589FCY 184 bp overlap
ChIP GM12878 ENCFF589FCY 184 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 184 bp overlap
POLR2A 1 dataset
ChIP GM12892 ENCFF245LYF 100 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 184 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 184 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 184 bp overlap
RAD21 6 datasets
ChIP GM12878 ENCFF101UQZ 167 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 114 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 88 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 184 bp overlap
ChIP lymphoblast GSE155324.RAD21.lymphoblast 184 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 184 bp overlap
RFX5 8 datasets
ChIP A-549 ENCSR064LJN.RFX5.A-549 184 bp overlap
ChIP A549 ENCFF220PEX 84 bp overlap
ChIP HeLa-S3 ENCSR000ECX.RFX5.HeLa-S3 160 bp overlap
ChIP IMR-90 ENCSR000EFD.RFX5.IMR-90 184 bp overlap
ChIP K-562 ENCSR000EGO.RFX5.K-562 108 bp overlap
ChIP MCF-7 ENCFF983ILY 59 bp overlap
ChIP MCF-7 ENCSR924TVL.RFX5.MCF-7 184 bp overlap
ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 157 bp overlap
RUNX1 4 datasets
ChIP ME-1 GSE117138.RUNX1.ME-1 184 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 184 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 157 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 147 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SMARCA4 8 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 159 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 178 bp overlap
ChIP A-549_AG15690 GSE132290.SMARCA4.A-549_AG15690 184 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 184 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 144 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 172 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 91 bp overlap
SMARCA5 2 datasets
ChIP GM12878 ENCFF327LDR 184 bp overlap
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 84 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 184 bp overlap
SPI1 6 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 95 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 101 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 161 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 176 bp overlap
ChIP GM12891 ENCFF563IUT 177 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 117 bp overlap
TCF12 3 datasets
ChIP K-562 ENCSR189TRZ.TCF12.K-562 184 bp overlap
ChIP K562 ENCFF909RDY 137 bp overlap
ChIP K562 ENCFF909RDY 184 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 117 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 184 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 156 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 184 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 86 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 184 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 136 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 170 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 184 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap