chrX : 134,802,923 134,803,464
541 bp 62 TFs 5 linked genes
This 541 bp open chromatin element is linked to 5 target genes and is bound by 62 transcription factors.
Linked Genes
5 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
PABIR2 5.7 kb Proximal Proximity
PABIR3 6.1 kb Proximal Proximity
MOSPD1 111.9 kb Distal Multiome
RTL8C 229.0 kb Distal Multiome
RTL8A 248.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:134,797,923 – 134,808,464
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 208 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 175 bp overlap
BRD4 2 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 61 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 187 bp overlap
ChIP K562 ENCFF673OEZ 278 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 220 bp overlap
ChIP HepG2 ENCFF175DFS 305 bp overlap
CEBPB 6 datasets
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 177 bp overlap
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 110 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 174 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 119 bp overlap
ChIP K562 ENCFF189VBN 271 bp overlap
ChIP K562 ENCFF584CTB 514 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 280 bp overlap
ChIP BLaER1 ENCFF274GAT 223 bp overlap
ChIP BLaER1 ENCFF364PUR 389 bp overlap
ChIP BLaER1 ENCFF460KDD 294 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 186 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 180 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 72 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 73 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 237 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 193 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 119 bp overlap
FOXA2 2 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 121 bp overlap
ChIP DE DE-FOXA2-1 322 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 132 bp overlap
GATA1 5 datasets
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 148 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 234 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 157 bp overlap
ChIP erythroblast ENCFF867JAR 70 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 329 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 312 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 427 bp overlap
ChIP DE DE-GATA4-2 541 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 193 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 234 bp overlap
ChIP foregut GSE117136.GATA4.foregut 283 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 294 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 295 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 202 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 224 bp overlap
ChIP DE DE-GATA6-1 375 bp overlap
ChIP DE DE-GATA6-2 541 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 277 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 289 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 317 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 511 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 322 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 285 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 175 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 329 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 445 bp overlap
ChIP foregut GSE117136.GATA6.foregut 401 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 320 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 276 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 274 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 303 bp overlap
GRHL2 1 dataset
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 98 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 223 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 193 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 175 bp overlap
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 114 bp overlap
HNF4A 5 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 161 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 108 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 173 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 179 bp overlap
ChIP HepG2 ENCFF146SSF 361 bp overlap
HNF4G 2 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF323ATZ 291 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 269 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 332 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 115 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 156 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 149 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 144 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 279 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 54 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 229 bp overlap
NR4A1 1 dataset
ChIP K-562 ENCSR130PDE.NR4A1.K-562 541 bp overlap
PATZ1 1 dataset
ChIP HepG2 ENCFF723PFC 401 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 113 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 141 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 60 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 481 bp overlap
PSIP1 2 datasets
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 91 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 81 bp overlap
RBBP5 1 dataset
ChIP K562 ENCFF070CVK 541 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 541 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 174 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 459 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 299 bp overlap
SOX13 3 datasets
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 395 bp overlap
ChIP HepG2 ENCFF062VSQ 280 bp overlap
ChIP HepG2 ENCFF231PAK 341 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 325 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 442 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 336 bp overlap
SOX6 5 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 403 bp overlap
ChIP HepG2 ENCFF767OCK 448 bp overlap
ChIP K-562 ENCSR788RSW.SOX6.K-562 541 bp overlap
ChIP K562 ENCFF059YCJ 323 bp overlap
ChIP K562 ENCFF059YCJ 147 bp overlap
TP53 2 datasets
ChIP K-562_R282W_Daunorubicin GSE131484.TP53.K-562_R282W_Daunorubicin 272 bp overlap
ChIP MOLM-13_R282W_Daunorubicin GSE131484.TP53.MOLM-13_R282W_Daunorubicin 309 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 438 bp overlap
ZBTB7A 4 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 348 bp overlap
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 124 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 323 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 107 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 343 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 210 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 180 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 212 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 166 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 524 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 339 bp overlap