chrX : 102,125,337 – 102,126,044
707 bp 60 TFs 1 linked gene
This 707 bp open chromatin element is linked to TCEAL2 and is bound by 60 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TCEAL2 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:102,120,337 – 102,131,044
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ARNT2 5 datasets
Motif DE_12h DE_12h-ARNT2_MA1464.2 8 bp overlap
Motif DE_36h DE_36h-ARNT2_MA1464.2 8 bp overlap
Motif DE_48h DE_48h-ARNT2_MA1464.2 8 bp overlap
Motif DE_60h DE_60h-ARNT2_MA1464.2 8 bp overlap
Motif DE_72h DE_72h-ARNT2_MA1464.2 8 bp overlap
ARNT::HIF1A 9 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_72h DE_72h-ARNTHIF1A_MA0259.2 5 bp overlap
Arnt 5 datasets
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
Motif DE_36h DE_36h-Arnt_MA0004.1 6 bp overlap
Motif DE_48h DE_48h-Arnt_MA0004.1 6 bp overlap
Motif DE_60h DE_60h-Arnt_MA0004.1 6 bp overlap
Motif DE_72h DE_72h-Arnt_MA0004.1 6 bp overlap
Arntl 5 datasets
Motif DE_12h DE_12h-Arntl_MA0603.2 8 bp overlap
Motif DE_36h DE_36h-Arntl_MA0603.2 8 bp overlap
Motif DE_48h DE_48h-Arntl_MA0603.2 8 bp overlap
Motif DE_60h DE_60h-Arntl_MA0603.2 8 bp overlap
Motif DE_72h DE_72h-Arntl_MA0603.2 8 bp overlap
BCOR 3 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 265 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 247 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 71 bp overlap
BHLHE40 5 datasets
Motif DE_12h DE_12h-BHLHE40_MA0464.3 8 bp overlap
Motif DE_36h DE_36h-BHLHE40_MA0464.3 8 bp overlap
Motif DE_48h DE_48h-BHLHE40_MA0464.3 8 bp overlap
Motif DE_60h DE_60h-BHLHE40_MA0464.3 8 bp overlap
Motif DE_72h DE_72h-BHLHE40_MA0464.3 8 bp overlap
BHLHE41 5 datasets
Motif DE_12h DE_12h-BHLHE41_MA0636.1 10 bp overlap
Motif DE_36h DE_36h-BHLHE41_MA0636.1 10 bp overlap
Motif DE_48h DE_48h-BHLHE41_MA0636.1 10 bp overlap
Motif DE_60h DE_60h-BHLHE41_MA0636.1 10 bp overlap
Motif DE_72h DE_72h-BHLHE41_MA0636.1 10 bp overlap
BRD4 8 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 164 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 234 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 224 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 413 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 126 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 84 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 224 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 240 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 112 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 199 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 362 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 182 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 103 bp overlap
Creb3l2 5 datasets
Motif DE_12h DE_12h-Creb3l2_MA0608.1 9 bp overlap
Motif DE_36h DE_36h-Creb3l2_MA0608.1 9 bp overlap
Motif DE_48h DE_48h-Creb3l2_MA0608.1 9 bp overlap
Motif DE_60h DE_60h-Creb3l2_MA0608.1 9 bp overlap
Motif DE_72h DE_72h-Creb3l2_MA0608.1 9 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 224 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 157 bp overlap
EZH2 1 dataset
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 196 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 232 bp overlap
HES1 5 datasets
Motif DE_12h DE_12h-HES1_MA1099.3 8 bp overlap
Motif DE_36h DE_36h-HES1_MA1099.3 8 bp overlap
Motif DE_48h DE_48h-HES1_MA1099.3 8 bp overlap
Motif DE_60h DE_60h-HES1_MA1099.3 8 bp overlap
Motif DE_72h DE_72h-HES1_MA1099.3 8 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 250 bp overlap
KLF15 9 datasets
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
Motif DE_36h DE_36h-KLF15_MA1513.2 8 bp overlap
Motif DE_36h DE_36h-KLF15_MA1513.2 8 bp overlap
Motif DE_36h DE_36h-KLF15_MA1513.2 8 bp overlap
Motif DE_48h DE_48h-KLF15_MA1513.2 8 bp overlap
Motif DE_60h DE_60h-KLF15_MA1513.2 8 bp overlap
Motif DE_60h DE_60h-KLF15_MA1513.2 8 bp overlap
Motif DE_60h DE_60h-KLF15_MA1513.2 8 bp overlap
Motif DE_72h DE_72h-KLF15_MA1513.2 8 bp overlap
MAX 6 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
Motif DE_36h DE_36h-MAX_MA0058.4 6 bp overlap
Motif DE_48h DE_48h-MAX_MA0058.4 6 bp overlap
Motif DE_60h DE_60h-MAX_MA0058.4 6 bp overlap
Motif DE_72h DE_72h-MAX_MA0058.4 6 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 303 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MITF 8 datasets
ChIP 501-mel GSE137522.MITF.501-mel 372 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 376 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 376 bp overlap
Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap
Motif DE_36h DE_36h-MITF_MA0620.4 10 bp overlap
Motif DE_48h DE_48h-MITF_MA0620.4 10 bp overlap
Motif DE_60h DE_60h-MITF_MA0620.4 10 bp overlap
Motif DE_72h DE_72h-MITF_MA0620.4 10 bp overlap
MLX 5 datasets
Motif DE_12h DE_12h-MLX_MA0663.1 10 bp overlap
Motif DE_36h DE_36h-MLX_MA0663.1 10 bp overlap
Motif DE_48h DE_48h-MLX_MA0663.1 10 bp overlap
Motif DE_60h DE_60h-MLX_MA0663.1 10 bp overlap
Motif DE_72h DE_72h-MLX_MA0663.1 10 bp overlap
MLXIPL 5 datasets
Motif DE_12h DE_12h-MLXIPL_MA0664.2 8 bp overlap
Motif DE_36h DE_36h-MLXIPL_MA0664.2 8 bp overlap
Motif DE_48h DE_48h-MLXIPL_MA0664.2 8 bp overlap
Motif DE_60h DE_60h-MLXIPL_MA0664.2 8 bp overlap
Motif DE_72h DE_72h-MLXIPL_MA0664.2 8 bp overlap
MNT 5 datasets
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
Motif DE_36h DE_36h-MNT_MA0825.2 6 bp overlap
Motif DE_48h DE_48h-MNT_MA0825.2 6 bp overlap
Motif DE_60h DE_60h-MNT_MA0825.2 6 bp overlap
Motif DE_72h DE_72h-MNT_MA0825.2 6 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 194 bp overlap
Mlxip 5 datasets
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
Motif DE_36h DE_36h-Mlxip_MA0622.2 6 bp overlap
Motif DE_48h DE_48h-Mlxip_MA0622.2 6 bp overlap
Motif DE_60h DE_60h-Mlxip_MA0622.2 6 bp overlap
Motif DE_72h DE_72h-Mlxip_MA0622.2 6 bp overlap
PATZ1 3 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 230 bp overlap
PLAGL2 1 dataset
Motif DE_12h DE_12h-PLAGL2_MA1548.2 8 bp overlap
POLR2A 7 datasets
ChIP body of pancreas ENCFF727UBE 437 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 223 bp overlap
ChIP ovary ENCFF425PQK 377 bp overlap
ChIP sigmoid colon ENCFF754JQR 365 bp overlap
ChIP spleen ENCFF446ZGT 275 bp overlap
ChIP thyroid gland ENCFF979LRR 382 bp overlap
ChIP uterus ENCFF208ADI 461 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 196 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 480 bp overlap
PRDM9 4 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
REST 1 dataset
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 309 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 324 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 222 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 196 bp overlap
SREBF1 5 datasets
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
Motif DE_36h DE_36h-SREBF1_MA0829.3 10 bp overlap
Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap
Motif DE_72h DE_72h-SREBF1_MA0829.3 10 bp overlap
SREBF2 5 datasets
Motif DE_12h DE_12h-SREBF2_MA0828.3 10 bp overlap
Motif DE_36h DE_36h-SREBF2_MA0828.3 10 bp overlap
Motif DE_48h DE_48h-SREBF2_MA0828.3 10 bp overlap
Motif DE_60h DE_60h-SREBF2_MA0828.3 10 bp overlap
Motif DE_72h DE_72h-SREBF2_MA0828.3 10 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 356 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 299 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TFE3 5 datasets
Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap
Motif DE_36h DE_36h-TFE3_MA0831.3 10 bp overlap
Motif DE_48h DE_48h-TFE3_MA0831.3 10 bp overlap
Motif DE_60h DE_60h-TFE3_MA0831.3 10 bp overlap
Motif DE_72h DE_72h-TFE3_MA0831.3 10 bp overlap
TFEB 5 datasets
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
Motif DE_36h DE_36h-TFEB_MA0692.2 8 bp overlap
Motif DE_48h DE_48h-TFEB_MA0692.2 8 bp overlap
Motif DE_60h DE_60h-TFEB_MA0692.2 8 bp overlap
Motif DE_72h DE_72h-TFEB_MA0692.2 8 bp overlap
TFEC 5 datasets
Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap
Motif DE_36h DE_36h-TFEC_MA0871.3 8 bp overlap
Motif DE_48h DE_48h-TFEC_MA0871.3 8 bp overlap
Motif DE_60h DE_60h-TFEC_MA0871.3 8 bp overlap
Motif DE_72h DE_72h-TFEC_MA0871.3 8 bp overlap
TOE1 1 dataset
ChIP MCF-7 ENCFF544WQF 301 bp overlap
USF1 12 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif DE_36h DE_36h-USF1_MA0093.4 10 bp overlap
Motif DE_48h DE_48h-USF1_MA0093.4 10 bp overlap
Motif DE_60h DE_60h-USF1_MA0093.4 10 bp overlap
Motif DE_72h DE_72h-USF1_MA0093.4 10 bp overlap
ChIP GM12878 ENCSR000BGI.USF1.GM12878 152 bp overlap
ChIP Ishikawa ENCFF728IEG 94 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 206 bp overlap
ChIP SK-N-SH ENCFF967PDP 311 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 290 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 174 bp overlap
ChIP WTC11 ENCFF699QGS 425 bp overlap
USF2 8 datasets
Motif DE_12h DE_12h-USF2_MA0526.5 10 bp overlap
Motif DE_36h DE_36h-USF2_MA0526.5 10 bp overlap
Motif DE_48h DE_48h-USF2_MA0526.5 10 bp overlap
Motif DE_60h DE_60h-USF2_MA0526.5 10 bp overlap
Motif DE_72h DE_72h-USF2_MA0526.5 10 bp overlap
ChIP IMR-90 ENCFF438KUN 257 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 167 bp overlap
ChIP WTC11 ENCFF139JAW 309 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 374 bp overlap
ZBED4 7 datasets
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
Motif DE_36h DE_36h-ZBED4_MA2328.1 10 bp overlap
Motif DE_36h DE_36h-ZBED4_MA2328.1 10 bp overlap
Motif DE_48h DE_48h-ZBED4_MA2328.1 10 bp overlap
Motif DE_60h DE_60h-ZBED4_MA2328.1 10 bp overlap
Motif DE_60h DE_60h-ZBED4_MA2328.1 10 bp overlap
Motif DE_72h DE_72h-ZBED4_MA2328.1 10 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 118 bp overlap
ZNF281 4 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
ZNF320 3 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap
ZNF331 4 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
Motif DE_48h DE_48h-ZNF331_MA1726.2 10 bp overlap
Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 443 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
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