chrX : 34,560,184 – 34,560,763

579 bp 65 TFs 0 linked genes

This 579 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

65 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 310 bp overlap

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 114 bp overlap

BCOR 1 dataset

ChIP WA01 GSE104690.BCOR.WA01 214 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 146 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 201 bp overlap

DMRTC2 1 dataset

Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap

ERF::FOXI1 1 dataset

Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap

ERF::FOXO1 1 dataset

Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap

ERG 1 dataset

ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 91 bp overlap

ESR2 1 dataset

Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 128 bp overlap

GATA2 1 dataset

Motif DE_12h DE_12h-GATA2_MA0036.4 7 bp overlap

GATA4 1 dataset

Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap

GATA6 6 datasets

Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 355 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 319 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 524 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 319 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 515 bp overlap

Gata3 1 dataset

Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

IRF3 2 datasets

Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap

JUN 4 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 486 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 579 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 283 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 486 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 428 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 272 bp overlap

NANOG 10 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 172 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 573 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 415 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 188 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 579 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 579 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 543 bp overlap

ChIP hESC GSE20650.NANOG.hESC 171 bp overlap

ChIP hESC GSE18292.NANOG.hESC 141 bp overlap

Nfat5 1 dataset

Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap

Nfatc2 1 dataset

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 318 bp overlap

PLAG1 1 dataset

Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap

POU5F1 9 datasets

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 573 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 405 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 138 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 187 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 249 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 178 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 579 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 218 bp overlap

PRDM1 1 dataset

Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap

PRDM9 1 dataset

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

PROX1 1 dataset

Motif DE_12h DE_12h-PROX1_MA0794.1 12 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RARA 1 dataset

Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 235 bp overlap

SIX1 1 dataset

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

SIX2 1 dataset

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 557 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 529 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 579 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 403 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 470 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 579 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 155 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 352 bp overlap

SP1 3 datasets

ChIP H1 ENCFF263FUH 321 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 181 bp overlap

SPIC 1 dataset

Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap

STAT1::STAT2 1 dataset

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

Stat2 1 dataset

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

TBP 1 dataset

ChIP hESC GSE122298.TBP.hESC 199 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 111 bp overlap

TFCP2 1 dataset

Motif DE_12h DE_12h-TFCP2_MA1968.2 9 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

THRB 1 dataset

Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap

TP53 1 dataset

ChIP H9_ectoderm_IFI16 GSE142050.TP53.H9_ectoderm_IFI16 512 bp overlap

TRPS1 1 dataset

Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 130 bp overlap

ZNF184 2 datasets

Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 313 bp overlap

ZNF257 1 dataset

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

ZNF274 1 dataset

Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap

ZNF324 1 dataset

Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap

ZNF354A 1 dataset

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

ZNF384 1 dataset

Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 359 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

ZNF701 1 dataset

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap

ZNF766 1 dataset

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap