chr18 : 61,870,200 – 61,870,544

344 bp 83 TFs 0 linked genes

This 344 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

83 transcription factors

APC 1 dataset

ChIP HCT-116 GSE103894.APC.HCT-116 227 bp overlap

AR 1 dataset

ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 228 bp overlap

BHLHE40 1 dataset

ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 156 bp overlap

BRD4 3 datasets

ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 258 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 236 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 167 bp overlap

CREBBP 1 dataset

ChIP fibroblast_senescent GSE106146.CREBBP.fibroblast_senescent 241 bp overlap

CTCF 2 datasets

ChIP RH4 GSE83726.CTCF.RH4 196 bp overlap

ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 219 bp overlap

CUX1 1 dataset

Motif DE_12h DE_12h-CUX1_MA0754.3 9 bp overlap

CUX2 1 dataset

Motif DE_12h DE_12h-CUX2_MA0755.2 9 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 114 bp overlap

ETV1 2 datasets

ChIP GIST GSE22441.ETV1.GIST 200 bp overlap

ChIP GIST-T1 GSE106624.ETV1.GIST-T1 112 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 72 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOS 1 dataset

ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 174 bp overlap

FOSL2 1 dataset

ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 188 bp overlap

FOXA1 2 datasets

Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap

ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 84 bp overlap

FOXA2 1 dataset

Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap

FOXA3 1 dataset

Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap

FOXD1 1 dataset

Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap

FOXD3 1 dataset

Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap

FOXF1 1 dataset

ChIP GIST48 GSE106624.FOXF1.GIST48 196 bp overlap

FOXG1 1 dataset

Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap

FOXI1 1 dataset

Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap

FOXK1 1 dataset

Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

FOXO4 1 dataset

Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap

FOXP1 2 datasets

Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap

ChIP H9 GSE31006.FOXP1.H9 207 bp overlap

FOXP2 4 datasets

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

ChIP PFSK-1 ENCFF349WGE 248 bp overlap

ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 225 bp overlap

ChIP SK-N-MC ENCFF865YOS 228 bp overlap

FOXP3 1 dataset

Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap

FOXP4 1 dataset

Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap

FOXS1 1 dataset

Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap

Foxf1 1 dataset

Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap

Foxj2 1 dataset

Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap

Foxj3 1 dataset

Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

Foxo1 1 dataset

Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap

GRHL2 1 dataset

Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap

HDAC2 2 datasets

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 216 bp overlap

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 316 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 314 bp overlap

HMGB2 1 dataset

ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 344 bp overlap

KMT2A 1 dataset

ChIP L826 GSE83671.KMT2A.L826 115 bp overlap

MAX 1 dataset

ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 123 bp overlap

MED1 1 dataset

ChIP RH4 GSE83726.MED1.RH4 344 bp overlap

MED12 1 dataset

ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 130 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 151 bp overlap

MXI1 2 datasets

ChIP IMR-90 ENCFF040YVH 326 bp overlap

ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 267 bp overlap

MYC 1 dataset

ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 143 bp overlap

MYCN 3 datasets

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 342 bp overlap

ChIP NB-1643 GSE94782.MYCN.NB-1643 187 bp overlap

ChIP RH4 GSE83726.MYCN.RH4 317 bp overlap

MYOD1 4 datasets

ChIP RD GSE137168.MYOD1.RD 263 bp overlap

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 164 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 176 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 143 bp overlap

MYOG 1 dataset

ChIP RH4 GSE83726.MYOG.RH4 210 bp overlap

NANOG 1 dataset

ChIP WA09 GSE105028.NANOG.WA09 200 bp overlap

NCAPH2 2 datasets

ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 259 bp overlap

ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 257 bp overlap

NFATC3 1 dataset

Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap

Nfatc1 1 dataset

Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 1 dataset

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

ONECUT1 1 dataset

Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 210 bp overlap

POLR2A 1 dataset

ChIP upper lobe of left lung ENCFF199JUI 344 bp overlap

RAD21 1 dataset

ChIP RH4 GSE83726.RAD21.RH4 344 bp overlap

RELA 2 datasets

ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 172 bp overlap

ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 257 bp overlap

REST 1 dataset

ChIP liver ENCSR893QWP.REST.liver 155 bp overlap

RUNX1 1 dataset

ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 197 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 185 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 303 bp overlap

SMAD2 1 dataset

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 344 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 341 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 310 bp overlap

SMAD3 1 dataset

ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 176 bp overlap

SMARCA2 1 dataset

ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 290 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 246 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 186 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 158 bp overlap

SOX8 2 datasets

ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 189 bp overlap

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 344 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

USF1 2 datasets

ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 231 bp overlap

ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 129 bp overlap

USF2 2 datasets

ChIP IMR-90 ENCFF438KUN 117 bp overlap

ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 233 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 90 bp overlap

ZBTB32 1 dataset

Motif DE_12h DE_12h-ZBTB32_MA1580.1 10 bp overlap

ZIM3 1 dataset

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap