chr18 : 29,361,665 – 29,362,158
493 bp 63 TFs 1 linked gene
This 493 bp open chromatin element is linked to ENSG00000265980 and is bound by 63 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000265980 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:29,356,665 – 29,367,158
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 92 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CTCF 135 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 173 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 247 bp overlap
ChIP A673 ENCFF123WOM 325 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 251 bp overlap
ChIP C4-2B ENCFF821XVN 362 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 119 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 127 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 203 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 134 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 112 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 99 bp overlap
ChIP GM23338 ENCFF531QOI 224 bp overlap
ChIP GM23338 ENCFF772DML 174 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 199 bp overlap
ChIP H1 ENCFF764RHO 243 bp overlap
ChIP H9 ENCFF152GTF 227 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 224 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 244 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 209 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 208 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 172 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 181 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 171 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 187 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 228 bp overlap
ChIP HEK293T GSE103651.CTCF.HEK293T 59 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 117 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 180 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 157 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 144 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 185 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 115 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF127KUP 225 bp overlap
ChIP HepG2 ENCFF348BUL 190 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 179 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 177 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 135 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 180 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 128 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 149 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 124 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 173 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 177 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 168 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 177 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 146 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 154 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 172 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 147 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 179 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 260 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 117 bp overlap
ChIP K562 ENCFF400DFR 211 bp overlap
ChIP K562 ENCFF598YSU 244 bp overlap
ChIP LNCAP ENCFF223HIG 380 bp overlap
ChIP LNCAP ENCFF700QXT 377 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 288 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 120 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 317 bp overlap
ChIP MCF-7 ENCFF139NQI 234 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 111 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 253 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 258 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 119 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 207 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 272 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 169 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 123 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 163 bp overlap
ChIP NB4 ENCFF155DNY 216 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 143 bp overlap
ChIP OCI-LY1 ENCFF455ESK 355 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 330 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 336 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 253 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 274 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 332 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 194 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 223 bp overlap
ChIP SK-N-SH ENCFF575DMG 142 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 156 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 257 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 376 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 263 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 184 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 251 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 260 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 355 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 320 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 165 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 177 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 174 bp overlap
ChIP VCaP ENCFF858YQT 452 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 135 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 159 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 128 bp overlap
ChIP WTC11 ENCFF658QVH 324 bp overlap
ChIP chondrocyte ENCFF134ORZ 395 bp overlap
ChIP endodermal cell ENCFF471YCZ 211 bp overlap
ChIP endodermal cell ENCFF471YCZ 108 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 180 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 149 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 239 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 205 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 243 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 234 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 201 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 133 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 201 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 192 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 182 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 139 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 196 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 167 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 243 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 190 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 272 bp overlap
ChIP neural progenitor cell ENCFF420RBO 285 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 165 bp overlap
ChIP placenta ENCFF029PHY 313 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 145 bp overlap
ChIP testis ENCFF919VBQ 311 bp overlap
CTCFL 3 datasets
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
ChIP K-562 ENCSR000BNK.CTCFL.K-562 119 bp overlap
ChIP K562 ENCFF883NXC 171 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 476 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 170 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
ERF::NHLH1 1 dataset
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 405 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 319 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 169 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 3 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 154 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
PATZ1 3 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
PLAG1 2 datasets
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
RAD21 11 datasets
ChIP H1 ENCFF698EWO 133 bp overlap
ChIP H1 ENCFF967OJF 228 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 150 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 116 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 174 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 160 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 199 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 204 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 183 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 168 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 174 bp overlap
RFX7 1 dataset
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUNX2 1 dataset
Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 207 bp overlap
SP1 3 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 3 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 3 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
ChIP HEK293 ENCFF087XLA 76 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 197 bp overlap
TEF 1 dataset
Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
ZNF148 3 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF274 2 datasets
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 195 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 216 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
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