chr17 : 46,814,387 – 46,815,027

640 bp 61 TFs 1 linked gene

This 640 bp open chromatin element is linked to WNT3 and is bound by 61 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
WNT3		3.7 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

61 transcription factors

AGO1 1 dataset

ChIP Hep-G2 GSE120104.AGO1.Hep-G2 198 bp overlap

BRD4 3 datasets

ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 259 bp overlap

ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 215 bp overlap

ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 255 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF031ISE 340 bp overlap

ChIP BLaER1 ENCFF262VBH 218 bp overlap

DMRTA2 1 dataset

Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap

E2F6 1 dataset

ChIP K-562 ENCSR000EWJ.E2F6.K-562 151 bp overlap

EGR1 3 datasets

ChIP K-562 ENCSR024CNP.EGR1.K-562 302 bp overlap

ChIP K-562 ENCSR000BNE.EGR1.K-562 156 bp overlap

ChIP K562 ENCFF006PJY 245 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 425 bp overlap

EOMES 1 dataset

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

ETV5::DRGX 1 dataset

Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap

EZH2 2 datasets

ChIP fibroblast of lung ENCFF479BAW 557 bp overlap

ChIP myotube ENCSR000ASZ.EZH2.myotube 354 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 209 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

GATA6 3 datasets

ChIP DE_D1 S41-DE-d1-GATA6-exp2 309 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 377 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 381 bp overlap

GLIS2 1 dataset

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 237 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 520 bp overlap

HDGF 1 dataset

ChIP K-562 ENCSR563YDA.HDGF.K-562 477 bp overlap

HNRNPLL 2 datasets

ChIP K-562 GSE120104.HNRNPLL.K-562 178 bp overlap

ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 227 bp overlap

KDM1A 1 dataset

ChIP K562 ENCFF934ZRG 93 bp overlap

MGA 1 dataset

Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap

MYOD1 1 dataset

ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 228 bp overlap

NELFE 2 datasets

ChIP K-562_HS GSE112379.NELFE.K-562_HS 50 bp overlap

ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 244 bp overlap

NFKB1 2 datasets

ChIP HEK293T GSE129618.NFKB1.HEK293T 236 bp overlap

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 406 bp overlap

NR2F1 1 dataset

ChIP K562 ENCFF221HJH 98 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 254 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 528 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

Rhox11 1 dataset

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 509 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 627 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 581 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 334 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 581 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 628 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 282 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 467 bp overlap

SP2 1 dataset

ChIP HEK293 ENCSR807LQP.SP2.HEK293 225 bp overlap

SUZ12 1 dataset

ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 63 bp overlap

TAF15 1 dataset

ChIP Hep-G2 GSE120104.TAF15.Hep-G2 170 bp overlap

TBR1 1 dataset

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

TBX1 1 dataset

Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap

TBX18 1 dataset

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

TBX21 1 dataset

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

TBX4 1 dataset

Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap

TBX5 1 dataset

Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 154 bp overlap

TFAP2A 1 dataset

ChIP WA09 GSE105081.TFAP2A.WA09 293 bp overlap

TFAP2B 1 dataset

Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap

TFAP2C 3 datasets

Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 640 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 523 bp overlap

TP53 1 dataset

ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 250 bp overlap

TP73 1 dataset

Motif DE_12h DE_12h-TP73_MA0861.2 16 bp overlap

Tbx6 1 dataset

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

ZBTB18 1 dataset

Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap

ZBTB48 1 dataset

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 317 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZEB2 2 datasets

ChIP K-562 ENCSR004GKA.ZEB2.K-562 346 bp overlap

ChIP K-562 ENCSR322CFO.ZEB2.K-562 283 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 192 bp overlap

ZFX 1 dataset

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 271 bp overlap

ZKSCAN1 1 dataset

ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 119 bp overlap

ZNF148 1 dataset

ChIP K-562 ENCSR018MSO.ZNF148.K-562 123 bp overlap

ZNF276 1 dataset

ChIP Hep-G2 ENCSR076KLJ.ZNF276.Hep-G2 141 bp overlap

ZNF281 1 dataset

ChIP K562 ENCFF594VNM 233 bp overlap

ZNF572 1 dataset

ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 172 bp overlap

ZNF652 1 dataset

Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap

ZNF7 1 dataset

ChIP K562 ENCFF096OHS 381 bp overlap