chr15 : 67,267,516 67,268,376
860 bp 61 TFs 5 linked genes
This 860 bp open chromatin element is linked to 5 target genes and is bound by 61 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
IQCH 13.1 kb Distal Multiome
AAGAB 13.2 kb Distal Multiome
SMAD3 202.3 kb Distal Multiome
IQCH-AS1 253.6 kb Distal Multiome
MAP2K5 274.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:67,262,516 – 67,273,376
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AR 11 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 56 bp overlap
ChIP LNCaP_DHT GSE83860.AR.LNCaP_DHT 112 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 89 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 114 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 96 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 142 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 333 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 155 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 177 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 106 bp overlap
ChIP prostate_P7_T GSE130408.AR.prostate_P7_T 200 bp overlap
ASCL1 1 dataset
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 138 bp overlap
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 127 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 228 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 245 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 240 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 287 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 227 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 125 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 344 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 265 bp overlap
ERG 3 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 114 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 134 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 241 bp overlap
FOXA1 14 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 66 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 92 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 76 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 58 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 64 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 75 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 253 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 245 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 384 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 264 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 221 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 72 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 54 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 227 bp overlap
FOXA2 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 635 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 335 bp overlap
ChIP DE DE-FOXA2-1 860 bp overlap
ChIP DE DE-FOXA2-2 845 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 81 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 708 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 409 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 152 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 331 bp overlap
GATA2 10 datasets
ChIP K562 ENCFF088XQT 338 bp overlap
ChIP K562 ENCFF830LLA 79 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 250 bp overlap
ChIP SH-SY5Y ENCFF485YIB 405 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 481 bp overlap
ChIP SK-N-SH ENCFF764OZD 247 bp overlap
ChIP SK-N-SH ENCFF764OZD 172 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 514 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 178 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 164 bp overlap
GATA3 8 datasets
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 357 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 278 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 167 bp overlap
ChIP SH-SY5Y ENCFF475HYF 481 bp overlap
ChIP SH-SY5Y ENCFF475HYF 343 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 608 bp overlap
ChIP SK-N-SH ENCFF040SSB 336 bp overlap
GATA4 10 datasets
ChIP A-549 GSE85002.GATA4.A-549 795 bp overlap
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 110 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 207 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 223 bp overlap
ChIP DE DE-GATA4-1 812 bp overlap
ChIP DE DE-GATA4-2 860 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 713 bp overlap
ChIP foregut GSE117136.GATA4.foregut 610 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 849 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 729 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 341 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 317 bp overlap
ChIP DE DE-GATA6-1 775 bp overlap
ChIP DE DE-GATA6-2 860 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 600 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 604 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 328 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 780 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 777 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 669 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 642 bp overlap
ChIP foregut GSE117136.GATA6.foregut 356 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 829 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 478 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 671 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 346 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 155 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 196 bp overlap
HNF4A 2 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 81 bp overlap
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
HNRNPLL 2 datasets
ChIP K-562 GSE120104.HNRNPLL.K-562 124 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 125 bp overlap
HOXB13 12 datasets
ChIP 22Rv1 GSE129951.HOXB13.22Rv1 66 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.HOXB13.prostate-cancer_PDX_189-4 71 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 54 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 77 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 58 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 139 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 96 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 51 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 62 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 175 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 146 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 74 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 265 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 255 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 183 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 190 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 298 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 171 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 148 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 185 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 131 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 197 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 297 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 247 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 326 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 199 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 336 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 337 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 479 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 139 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 331 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 362 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 153 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 860 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 820 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 768 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 173 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 732 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 843 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 266 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 213 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 117 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 188 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 377 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 199 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 61 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 219 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 152 bp overlap
ChIP HeLa GSE39263.ZNF143.HeLa 144 bp overlap
ZNF354B 1 dataset
ChIP K562 ENCFF955JQT 440 bp overlap
ZNF513 2 datasets
ChIP HEK293 ENCFF457TCC 405 bp overlap
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 264 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 357 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 277 bp overlap