chr15 : 64,143,425 – 64,143,630
205 bp 59 TFs 1 linked gene
This 205 bp open chromatin element is linked to SNX22 and is bound by 59 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SNX22 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:64,138,425 – 64,148,630
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 188 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 145 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 205 bp overlap
ChIP K562 ENCFF963TXY 187 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 205 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 173 bp overlap
ChIP K562 ENCFF673OEZ 205 bp overlap
CEBPB 1 dataset
ChIP K-562 ENCSR000EHE.CEBPB.K-562 126 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 105 bp overlap
CTCF 65 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 205 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 183 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 135 bp overlap
ChIP A549 ENCFF034FVO 205 bp overlap
ChIP DOHH2 ENCFF637WNW 205 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 205 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 190 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 173 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 205 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 200 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 138 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 176 bp overlap
ChIP GM12872 ENCFF697BYI 205 bp overlap
ChIP GM12878 ENCFF485TGR 199 bp overlap
ChIP GM12878 ENCFF511URZ 184 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 205 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 202 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 104 bp overlap
ChIP GM23338 ENCFF772DML 179 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 169 bp overlap
ChIP H1 ENCFF764RHO 205 bp overlap
ChIP H9 ENCFF152GTF 205 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 195 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 205 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 205 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 95 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 155 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 205 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 176 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 175 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 204 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 191 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 123 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 114 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 116 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 129 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 97 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 205 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 119 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 194 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 171 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 157 bp overlap
ChIP K562 ENCFF082GOI 156 bp overlap
ChIP K562 ENCFF111MGE 184 bp overlap
ChIP K562 ENCFF430KTH 205 bp overlap
ChIP K562 ENCFF598YSU 205 bp overlap
ChIP MCF-7 ENCFF198DQX 172 bp overlap
ChIP MCF-7 ENCFF210JUZ 205 bp overlap
ChIP MCF-7 ENCFF494VXA 172 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 169 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 131 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 205 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 205 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 160 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 170 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 205 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 205 bp overlap
ChIP RWPE2 ENCFF911IEE 205 bp overlap
ChIP RWPE2 ENCFF911IEE 205 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 187 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 151 bp overlap
ChIP endodermal cell ENCFF471YCZ 205 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 205 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 202 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 205 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF775HUO 205 bp overlap
ChIP K562 ENCFF775HUO 205 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000EWJ.E2F6.K-562 135 bp overlap
GABPA 2 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 179 bp overlap
ChIP K562 ENCFF996TSW 191 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 205 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 127 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 188 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 205 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 172 bp overlap
ChIP K562 ENCFF544PCK 205 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 205 bp overlap
ChIP DE DE-GATA4-2 205 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 205 bp overlap
ChIP DE DE-GATA6-2 205 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 204 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 205 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 205 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 205 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 200 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 205 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 158 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 205 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 202 bp overlap
HNRNPUL1 1 dataset
ChIP K-562 ENCSR296MXW.HNRNPUL1.K-562 205 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 151 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 199 bp overlap
KDM5B 1 dataset
ChIP SUM185 GSE46055.KDM5B.SUM185 115 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 205 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 160 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 101 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 187 bp overlap
ChIP K562 ENCFF320GSD 111 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 205 bp overlap
NCOR1 2 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 185 bp overlap
ChIP K562 ENCFF866HRM 205 bp overlap
NFE2L2 1 dataset
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 126 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 178 bp overlap
ChIP K562 ENCFF167YID 205 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 195 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 205 bp overlap
ChIP K562 ENCFF004YPK 205 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 112 bp overlap
ChIP K562 ENCFF286KMN 158 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 175 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 205 bp overlap
ChIP K562 ENCFF236IUS 162 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 205 bp overlap
RAD21 2 datasets
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 109 bp overlap
ChIP K562 ENCFF634XYR 205 bp overlap
RBM39 1 dataset
ChIP K-562 ENCSR764OXF.RBM39.K-562 137 bp overlap
REST 2 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 199 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 205 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 153 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 205 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 205 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 205 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 205 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 205 bp overlap
SMC3 3 datasets
ChIP HeLa GSE126990.SMC3.HeLa 193 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 193 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 193 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 84 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 155 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 205 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 111 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 94 bp overlap
TAL1 10 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 205 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 205 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 198 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 179 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 187 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 197 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 203 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 205 bp overlap
ChIP K562 ENCFF620GMX 139 bp overlap
ChIP K562 ENCFF661CCK 171 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 205 bp overlap
ChIP K562 ENCFF931DJY 183 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 205 bp overlap
ChIP K562 ENCFF319QZT 205 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 92 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 73 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 89 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 115 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 70 bp overlap
ZEB2 3 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 205 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 205 bp overlap
ChIP K562 ENCFF795CMH 205 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR117WTM.ZNF24.K-562 151 bp overlap
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