chr15 : 55,738,675 – 55,738,932
257 bp 55 TFs 1 linked gene
This 257 bp open chromatin element is linked to PRTG and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PRTG 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:55,733,675 – 55,743,932
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 205 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 257 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 257 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 154 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 219 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 127 bp overlap
ERG 3 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 248 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 219 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 220 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 164 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 164 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 164 bp overlap
ETV1 2 datasets
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 231 bp overlap
ChIP GIST-T1 GSE80443.ETV1.GIST-T1 197 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 257 bp overlap
EZH2 2 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 257 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 257 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 257 bp overlap
FLI1 4 datasets
ChIP A-673 GSE99959.FLI1.A-673 220 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 213 bp overlap
ChIP UAE GSE23730.FLI1.UAE 203 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 257 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 127 bp overlap
ChIP DE DE-FOXA2-2 106 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 84 bp overlap
ChIP DE DE-GATA4-2 95 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 80 bp overlap
ChIP foregut GSE117136.GATA4.foregut 64 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 74 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 58 bp overlap
ChIP DE DE-GATA6-2 95 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 136 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 92 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 202 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 257 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 257 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 256 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 96 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 79 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 78 bp overlap
HNRNPK 3 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 257 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 100 bp overlap
ChIP K562 ENCFF954RNO 150 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 242 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 236 bp overlap
KDM5B 1 dataset
ChIP SUM185 GSE46055.KDM5B.SUM185 145 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 257 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 257 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 229 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 257 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 257 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 235 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 140 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 77 bp overlap
RELA 1 dataset
ChIP BJAB_1h-activation GSE117250.RELA.BJAB_1h-activation 161 bp overlap
REST 1 dataset
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 240 bp overlap
RNF2 8 datasets
ChIP H1 ENCFF239FFS 257 bp overlap
ChIP H1 ENCFF239FFS 257 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 257 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 257 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 257 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 257 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 257 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 170 bp overlap
SIN3A 2 datasets
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 195 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 146 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 60 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 51 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 132 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 257 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 100 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 257 bp overlap
SMARCC1 1 dataset
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 163 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 215 bp overlap
SP2 3 datasets
ChIP HEK293 ENCFF181QXT 209 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 231 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 203 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 257 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 191 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 72 bp overlap
SPI1 2 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 170 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 167 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 115 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 230 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 257 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 257 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 230 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 257 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 257 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 257 bp overlap
ChIP HEK293 ENCFF944VMC 227 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 257 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 257 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 257 bp overlap
ZNF391 1 dataset
ChIP HEK293 ENCSR210MET.ZNF391.HEK293 254 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 257 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 257 bp overlap
ZNF444 1 dataset
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 220 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 240 bp overlap
ZNF512 3 datasets
ChIP K-562 ENCSR591CCL.ZNF512.K-562 217 bp overlap
ChIP K562 ENCFF601EMZ 257 bp overlap
ChIP WTC11 ENCFF086TTM 84 bp overlap
ZNF513 2 datasets
ChIP HEK293 ENCFF457TCC 257 bp overlap
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 250 bp overlap
ZNF580 1 dataset
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 218 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 94 bp overlap
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