chr14 : 56,811,355 56,811,797
442 bp 46 TFs 2 linked genes
This 442 bp open chromatin element is linked to OTX2-AS1 and OTX2 and is bound by 46 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
OTX2-AS1 1.4 kb Proximal Proximity
OTX2 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:56,806,355 – 56,816,797
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 219 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 417 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 442 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 367 bp overlap
BRD4 3 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 193 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 293 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 305 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 231 bp overlap
CBX7 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 83 bp overlap
ChIP hESC GSE133412.CBX7.hESC 94 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 306 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 218 bp overlap
CHD1 3 datasets
ChIP H1 ENCFF998XEK 207 bp overlap
ChIP H1 ENCFF998XEK 83 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 327 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 253 bp overlap
ChIP H1 ENCFF126NLU 442 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 352 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 405 bp overlap
ChIP H1 ENCFF329MAX 420 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 402 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 141 bp overlap
ChIP BLaER1 ENCFF262VBH 132 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 150 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 117 bp overlap
EZH2 14 datasets
ChIP GM23338 ENCFF613YON 69 bp overlap
ChIP H1 ENCFF232NZA 442 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 259 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 214 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 216 bp overlap
ChIP astrocyte ENCFF365JTP 442 bp overlap
ChIP astrocyte ENCFF365JTP 235 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 273 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 127 bp overlap
ChIP hepatocyte ENCFF118DKH 111 bp overlap
ChIP hepatocyte ENCFF552DZB 442 bp overlap
ChIP keratinocyte ENCFF070STK 249 bp overlap
ChIP keratinocyte ENCFF070STK 107 bp overlap
ChIP myotube ENCFF857GWB 367 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 186 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 144 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 366 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 339 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 207 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 254 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 282 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 357 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 311 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 350 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 224 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 262 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 282 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 309 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 291 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 80 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 240 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 442 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 100 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 310 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 442 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 220 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 442 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 442 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 53 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 442 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 91 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 251 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 349 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 256 bp overlap
SMARCA4 3 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 309 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 195 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 376 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 213 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 196 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 279 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 397 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 238 bp overlap
SS18 2 datasets
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 442 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 166 bp overlap
SUZ12 13 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 208 bp overlap
ChIP H1 ENCFF881NFR 442 bp overlap
ChIP H1 ENCFF881NFR 442 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 78 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 75 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 102 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 89 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 220 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 442 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 222 bp overlap
ChIP NT2/D1 ENCFF574SXS 53 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 97 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 351 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 175 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap