chr13 : 90,352,876 90,353,252
376 bp 89 TFs 0 linked genes
This 376 bp open chromatin element has no linked target genes and is bound by 89 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:90,347,876 – 90,358,252
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
ALX3 2 datasets
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
Motif ES_0h ES_0h-ALX3_MA0634.2 6 bp overlap
AR 30 datasets
ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 306 bp overlap
ChIP LNCaP GSE117430.AR.LNCaP 190 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 175 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 136 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 128 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 110 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 137 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 167 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 271 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 189 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 172 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 163 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 279 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 274 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 209 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 243 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 238 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 318 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 288 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 376 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 342 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 143 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 177 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 199 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 189 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 214 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 169 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 220 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 81 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 95 bp overlap
ATF2 1 dataset
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
CBX3 1 dataset
ChIP K562 ENCFF733JGD 261 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CTCF 46 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 363 bp overlap
ChIP BE2C ENCFF757SRF 257 bp overlap
ChIP C4-2B ENCFF821XVN 376 bp overlap
ChIP C4-2B ENCFF821XVN 376 bp overlap
ChIP Caco-2 ENCFF753NZV 372 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 121 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP GM23338 ENCFF531QOI 283 bp overlap
ChIP H1 ENCFF764RHO 222 bp overlap
ChIP H9 ENCFF152GTF 205 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 99 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 305 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 83 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 112 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 183 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 88 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 164 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 105 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 134 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 250 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 114 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 168 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 151 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 215 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 211 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 161 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 184 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 131 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 170 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 221 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 134 bp overlap
ChIP endodermal cell ENCFF471YCZ 225 bp overlap
ChIP endodermal cell ENCFF471YCZ 303 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 216 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 289 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 97 bp overlap
ChIP neural crest cell ENCFF182LWK 283 bp overlap
ChIP neural progenitor cell ENCFF581WPG 376 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 212 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 115 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 158 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 294 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 376 bp overlap
DRGX 2 datasets
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
Motif ES_0h ES_0h-DRGX_MA1481.2 6 bp overlap
EGR1 1 dataset
ChIP macrophage_D1 GSE136216.EGR1.macrophage_D1 215 bp overlap
EMX1 2 datasets
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
Motif ES_0h ES_0h-EMX1_MA0612.3 6 bp overlap
EMX2 2 datasets
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
Motif ES_0h ES_0h-EMX2_MA0886.2 6 bp overlap
EN1 2 datasets
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
Motif ES_0h ES_0h-EN1_MA0027.3 6 bp overlap
ERF::FOXO1 2 datasets
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
EVX1 2 datasets
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
Motif ES_0h ES_0h-EVX1_MA0887.2 6 bp overlap
EVX2 2 datasets
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
Motif ES_0h ES_0h-EVX2_MA0888.2 6 bp overlap
FOXA1 10 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 301 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 183 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 189 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 305 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 207 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 142 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 249 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 211 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 167 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 200 bp overlap
FOXS1 1 dataset
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
GSX1 2 datasets
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
Motif ES_0h ES_0h-GSX1_MA0892.2 6 bp overlap
GSX2 2 datasets
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
Motif ES_0h ES_0h-GSX2_MA0893.3 7 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 119 bp overlap
HNF4G 2 datasets
ChIP 22Rv1 GSE85558.HNF4G.22Rv1 267 bp overlap
ChIP 22Rv1_Dox GSE85558.HNF4G.22Rv1_Dox 171 bp overlap
HOXA1 2 datasets
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
Motif ES_0h ES_0h-HOXA1_MA1495.2 6 bp overlap
HOXA2 2 datasets
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
Motif ES_0h ES_0h-HOXA2_MA0900.3 6 bp overlap
HOXA3 2 datasets
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXA6 2 datasets
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
Motif ES_0h ES_0h-HOXA6_MA1497.2 7 bp overlap
HOXB1 2 datasets
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
Motif ES_0h ES_0h-HOXB1_MA2093.1 7 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 296 bp overlap
HOXB2 2 datasets
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
Motif ES_0h ES_0h-HOXB2_MA0902.3 6 bp overlap
HOXB3 2 datasets
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
Motif ES_0h ES_0h-HOXB3_MA0903.2 6 bp overlap
HOXB5 2 datasets
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
Motif ES_0h ES_0h-HOXB5_MA0904.3 6 bp overlap
HOXB6 2 datasets
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
Motif ES_0h ES_0h-HOXB6_MA1500.2 7 bp overlap
HOXB7 2 datasets
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
Motif ES_0h ES_0h-HOXB7_MA1501.2 7 bp overlap
HOXB8 2 datasets
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
Motif ES_0h ES_0h-HOXB8_MA1502.2 7 bp overlap
HOXC13 1 dataset
Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap
HOXC8 2 datasets
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
Motif ES_0h ES_0h-HOXC8_MA1505.2 6 bp overlap
HOXD8 2 datasets
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Motif ES_0h ES_0h-HOXD8_MA0910.3 7 bp overlap
ISX 2 datasets
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
Motif ES_0h ES_0h-ISX_MA0654.2 6 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
LHX5 2 datasets
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
Motif ES_0h ES_0h-LHX5_MA1519.2 7 bp overlap
Lhx1 2 datasets
Motif DE_12h DE_12h-Lhx1_MA1518.3 10 bp overlap
Motif ES_0h ES_0h-Lhx1_MA1518.3 10 bp overlap
Lhx4 2 datasets
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Motif ES_0h ES_0h-Lhx4_MA0704.2 6 bp overlap
Lhx8 2 datasets
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
Motif ES_0h ES_0h-Lhx8_MA0705.2 6 bp overlap
MAZ 2 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEOX1 2 datasets
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
Motif ES_0h ES_0h-MEOX1_MA0661.2 7 bp overlap
MEOX2 2 datasets
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
Motif ES_0h ES_0h-MEOX2_MA0706.2 7 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
MIXL1 2 datasets
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
Motif ES_0h ES_0h-MIXL1_MA0662.2 6 bp overlap
MNX1 2 datasets
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
Motif ES_0h ES_0h-MNX1_MA0707.3 6 bp overlap
NKX6-2 2 datasets
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
Motif ES_0h ES_0h-NKX6-2_MA0675.2 6 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PDX1 4 datasets
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
Motif ES_0h ES_0h-PDX1_MA0132.3 6 bp overlap
ChIP hESC GSE58685.PDX1.hESC 174 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 312 bp overlap
POU6F1 2 datasets
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
Motif ES_0h ES_0h-POU6F1_MA0628.2 6 bp overlap
PRRX1 2 datasets
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
Motif ES_0h ES_0h-PRRX1_MA0716.2 6 bp overlap
Pgr 1 dataset
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 207 bp overlap
RAX2 2 datasets
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
Motif ES_0h ES_0h-RAX2_MA0717.2 6 bp overlap
SHOX 2 datasets
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
Motif ES_0h ES_0h-SHOX_MA0630.2 6 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP2 2 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
Shox2 2 datasets
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Motif ES_0h ES_0h-Shox2_MA0720.2 6 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TLX2 2 datasets
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
Motif ES_0h ES_0h-TLX2_MA1577.2 6 bp overlap
UNCX 2 datasets
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
Motif ES_0h ES_0h-UNCX_MA0721.2 6 bp overlap
VAX2 2 datasets
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
Motif ES_0h ES_0h-VAX2_MA0723.3 6 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
Zic1::Zic2 2 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 2 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap
mix-a 2 datasets
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap
Motif ES_0h ES_0h-mix-a_MA0621.2 7 bp overlap