chr13 : 44,117,050 – 44,117,238
188 bp 54 TFs 1 linked gene
This 188 bp open chromatin element is linked to LINC00390 and is bound by 54 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC00390 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:44,112,050 – 44,122,238
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 188 bp overlap
BRD4 5 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 188 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 188 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 60 bp overlap
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 178 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 65 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 140 bp overlap
CEBPA 2 datasets
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 150 bp overlap
ChIP MV4-11 GSE88746.CEBPA.MV4-11 188 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 179 bp overlap
CTCF 242 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 182 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 138 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 188 bp overlap
ChIP A673 ENCFF123WOM 188 bp overlap
ChIP AG04450 ENCFF116DJL 188 bp overlap
ChIP AG09309 ENCFF478XPS 188 bp overlap
ChIP AG10803 ENCFF549AQK 164 bp overlap
ChIP B cell ENCFF500PZO 188 bp overlap
ChIP B cell ENCFF506FKC 72 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 188 bp overlap
ChIP BE2C ENCFF757SRF 188 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 82 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 132 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 188 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 188 bp overlap
ChIP CD14-positive monocyte ENCFF590KQU 188 bp overlap
ChIP CD14-positive monocyte ENCFF590KQU 188 bp overlap
ChIP CUTLL1_DMSO GSE130140.CTCF.CUTLL1_DMSO 120 bp overlap
ChIP CUTLL1_GSI GSE130140.CTCF.CUTLL1_GSI 171 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 115 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 165 bp overlap
ChIP DND-41 ENCFF913MRA 129 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 176 bp overlap
ChIP DOHH2 ENCFF637WNW 188 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 188 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 169 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 90 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 158 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 126 bp overlap
ChIP GM23338 ENCFF531QOI 188 bp overlap
ChIP GM23338 ENCFF772DML 154 bp overlap
ChIP H1 ENCFF414GZI 184 bp overlap
ChIP H1 ENCFF764RHO 188 bp overlap
ChIP H9 ENCFF152GTF 152 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 170 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 151 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 112 bp overlap
ChIP HEC-1-B_F-mutation GSE140868.CTCF.HEC-1-B_F-mutation 65 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 107 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 105 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 188 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 58 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 158 bp overlap
ChIP HFF-Myc ENCFF680WYR 188 bp overlap
ChIP HFFc6 ENCFF005CJI 188 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 165 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 100 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 188 bp overlap
ChIP IMR-90 ENCFF887MRH 171 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 127 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 149 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 89 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 110 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 102 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 188 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 188 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 51 bp overlap
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 101 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 120 bp overlap
ChIP Loucy ENCFF359TVQ 188 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 188 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 166 bp overlap
ChIP NB4 ENCFF155DNY 162 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 139 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 188 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 117 bp overlap
ChIP Peyer's patch ENCFF701KWW 143 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 184 bp overlap
ChIP T-cell GSE115893.CTCF.T-cell 188 bp overlap
ChIP TALL-1_Pat1 GSE130140.CTCF.TALL-1_Pat1 107 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 137 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 128 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 185 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 143 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 157 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 68 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 103 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 134 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 188 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 188 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 133 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 188 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 153 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 114 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 73 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 188 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 97 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 125 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 113 bp overlap
ChIP adrenal gland ENCFF596QXB 188 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 188 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 188 bp overlap
ChIP ascending aorta ENCFF138DXQ 188 bp overlap
ChIP ascending-aorta ENCSR555DCD.CTCF.ascending-aorta 178 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 142 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 149 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 121 bp overlap
ChIP brain ENCFF163BBN 139 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 188 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 167 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 188 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 165 bp overlap
ChIP chondrocyte ENCFF134ORZ 176 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 188 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 188 bp overlap
ChIP coronary artery ENCFF383OZM 188 bp overlap
ChIP coronary artery ENCFF483TFF 188 bp overlap
ChIP coronary-artery ENCSR175FLL.CTCF.coronary-artery 188 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 130 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF562MJV 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF641PIN 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 188 bp overlap
ChIP endodermal cell ENCFF471YCZ 167 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 188 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 167 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 180 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 110 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 188 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 188 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 173 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 97 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 164 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 100 bp overlap
ChIP esophagus muscularis mucosa ENCFF421MEH 188 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 188 bp overlap
ChIP esophagus squamous epithelium ENCFF683HYK 188 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 188 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 188 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 188 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 175 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 175 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 166 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 187 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 177 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 188 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 162 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 152 bp overlap
ChIP fibroblast_DERMAL ENCSR000APM.CTCF.fibroblast_DERMAL 146 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 169 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 112 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 152 bp overlap
ChIP fibroblast_LUNG ENCSR000ANO.CTCF.fibroblast_LUNG 134 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 133 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 130 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 171 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 123 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 130 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 185 bp overlap
ChIP gastrocnemius medialis ENCFF307PRR 188 bp overlap
ChIP gastrocnemius medialis ENCFF307PRR 119 bp overlap
ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 188 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 188 bp overlap
ChIP gastrocnemius-medialis ENCSR071XWO.CTCF.gastrocnemius-medialis 95 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 188 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 156 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 150 bp overlap
ChIP gastroesophageal sphincter ENCFF607YRA 143 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 188 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 188 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 187 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 147 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 158 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 131 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 188 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 188 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 188 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 188 bp overlap
ChIP heart ENCSR565HBN.CTCF.heart 188 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 185 bp overlap
ChIP heart left ventricle ENCFF185CKY 188 bp overlap
ChIP heart left ventricle ENCFF185CKY 103 bp overlap
ChIP heart left ventricle ENCFF244ZHV 188 bp overlap
ChIP heart left ventricle ENCFF354HOQ 97 bp overlap
ChIP heart left ventricle ENCFF575JEQ 188 bp overlap
ChIP heart left ventricle ENCFF663LEI 188 bp overlap
ChIP heart left ventricle ENCFF832OXT 188 bp overlap
ChIP heart left ventricle ENCFF842XRG 188 bp overlap
ChIP heart left ventricle ENCFF888ERQ 188 bp overlap
ChIP heart left ventricle ENCFF987PUT 188 bp overlap
ChIP heart right ventricle ENCFF027ORH 188 bp overlap
ChIP heart right ventricle ENCFF435TKW 150 bp overlap
ChIP heart right ventricle ENCFF577TID 188 bp overlap
ChIP heart right ventricle ENCFF741WMU 188 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 188 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 188 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 171 bp overlap
ChIP hepatocyte ENCFF263BLJ 188 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 188 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 147 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 142 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 144 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 88 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 134 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 153 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 172 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 188 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 188 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 188 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 188 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 188 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 188 bp overlap
ChIP lower lobe of left lung ENCFF150FXW 188 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 188 bp overlap
ChIP lung ENCSR224WWI.CTCF.lung 168 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 92 bp overlap
ChIP myotube ENCFF981UHL 188 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 188 bp overlap
ChIP natural killer cell ENCFF517SNI 188 bp overlap
ChIP nephron ENCFF589HXU 188 bp overlap
ChIP neural progenitor cell ENCFF420RBO 188 bp overlap
ChIP neural progenitor cell ENCFF581WPG 188 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 188 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 91 bp overlap
ChIP osteoblast ENCFF491ZJZ 188 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 188 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 158 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 185 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 182 bp overlap
ChIP right atrium auricular region ENCFF696NTN 188 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 188 bp overlap
ChIP skin ENCSR485VQV.CTCF.skin 122 bp overlap
ChIP smooth muscle cell ENCFF656FBT 188 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 188 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 188 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 188 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 184 bp overlap
ChIP stomach ENCSR185CCV.CTCF.stomach 188 bp overlap
ChIP thoracic aorta ENCFF012WJQ 188 bp overlap
ChIP thoracic aorta ENCFF166PKA 188 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 188 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 115 bp overlap
ChIP tibial-artery ENCSR079YAP.CTCF.tibial-artery 178 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 188 bp overlap
ChIP upper lobe of left lung ENCFF654BFF 188 bp overlap
ChIP uterus ENCSR392SFJ.CTCF.uterus 186 bp overlap
ChIP uterus ENCSR684PGO.CTCF.uterus 188 bp overlap
CTCFL 4 datasets
ChIP FT282 GSE131931.CTCFL.FT282 188 bp overlap
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 101 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 183 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 184 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 188 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 126 bp overlap
ChIP BLaER1 ENCFF274GAT 98 bp overlap
ChIP BLaER1 ENCFF335XTP 168 bp overlap
ChIP BLaER1 ENCFF364PUR 138 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 100 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 175 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 143 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 180 bp overlap
FLI1 1 dataset
ChIP NB4 GSE23730.FLI1.NB4 68 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 188 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 188 bp overlap
HSF1 1 dataset
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 113 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 188 bp overlap
INTS13 1 dataset
ChIP HL-60_PMA GSE106359.INTS13.HL-60_PMA 180 bp overlap
JMJD1C 1 dataset
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 126 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 188 bp overlap
KMT2A 3 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 188 bp overlap
ChIP L826 GSE83671.KMT2A.L826 167 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 166 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 188 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 188 bp overlap
LMO2 3 datasets
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 146 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 128 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 123 bp overlap
MAFK 1 dataset
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 85 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 74 bp overlap
MYB 6 datasets
ChIP DU528 GSE94000.MYB.DU528 150 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 188 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 188 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 188 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 148 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 152 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 127 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk GSE83725.PAX3-FOXO1.Hs-352-Sk 171 bp overlap
PGR 1 dataset
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 61 bp overlap
POLR2A 2 datasets
ChIP gastroesophageal sphincter ENCFF070PCA 169 bp overlap
ChIP stomach ENCFF278MYS 87 bp overlap
RAD21 23 datasets
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 95 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 166 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 75 bp overlap
ChIP IMR-90 ENCFF752PTH 178 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 141 bp overlap
ChIP MDM GSE103477.RAD21.MDM 188 bp overlap
ChIP MDM_-dNS1 GSE103477.RAD21.MDM_-dNS1 136 bp overlap
ChIP MDM_H5N1 GSE103477.RAD21.MDM_H5N1 78 bp overlap
ChIP MDM_IFNb GSE103477.RAD21.MDM_IFNb 126 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 186 bp overlap
ChIP THP-1_PMA_Dex-0h GSE103477.RAD21.THP-1_PMA_Dex-0h 50 bp overlap
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 88 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 124 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 188 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 63 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 68 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 135 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 150 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.RAD21.THP-1_Pam3csk-180m-Flavo-060m 96 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 188 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 93 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 118 bp overlap
ChIP liver ENCFF522JHE 188 bp overlap
RUNX1 14 datasets
ChIP 697 GSE138031.RUNX1.697 179 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 166 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 188 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 166 bp overlap
ChIP HL-60 GSE107553.RUNX1.HL-60 116 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 62 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 62 bp overlap
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 188 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 64 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 64 bp overlap
ChIP MV4-11 GSE79899.RUNX1.MV4-11 166 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 188 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 188 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 188 bp overlap
RUNX1T1 7 datasets
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 174 bp overlap
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 188 bp overlap
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
ChIP Kasumi-1 GSE65427.RUNX1T1.Kasumi-1 125 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 155 bp overlap
ChIP Kasumi-1_shControl-AE GSE115115.RUNX1T1.Kasumi-1_shControl-AE 188 bp overlap
ChIP Kasumi-1_shTAF1-AE GSE115115.RUNX1T1.Kasumi-1_shTAF1-AE 188 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 188 bp overlap
SKI 2 datasets
ChIP HL-60 GSE107553.SKI.HL-60 188 bp overlap
ChIP HL-60_CRISPRCas9_ctrl GSE107553.SKI.HL-60_CRISPRCas9_ctrl 188 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 188 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 84 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 188 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 188 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 130 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 69 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 50 bp overlap
SMC1 2 datasets
ChIP HCAEC GSE101921.SMC1.HCAEC 188 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 130 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 188 bp overlap
SMC3 1 dataset
ChIP Hep-G2 ENCSR000EDW.SMC3.Hep-G2 116 bp overlap
SPI1 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 84 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 75 bp overlap
STAT1 1 dataset
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 144 bp overlap
STAT3 9 datasets
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 161 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 110 bp overlap
ChIP Th1_IL-6_C7 GSE130810.STAT3.Th1_IL-6_C7 134 bp overlap
ChIP Th1_IL-6_HyIL6 GSE130810.STAT3.Th1_IL-6_HyIL6 164 bp overlap
ChIP Th1_IL-6_Mut3 GSE130810.STAT3.Th1_IL-6_Mut3 188 bp overlap
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 155 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 113 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 188 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 188 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 127 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 188 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 159 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 188 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 119 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 173 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 188 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 137 bp overlap
Huangfu Lab · Publications · Resources · Contact