chr12 : 110,250,472 110,250,888
416 bp 60 TFs 0 linked genes
This 416 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:110,245,472 – 110,255,888
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 207 bp overlap
AR 30 datasets
ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 197 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 162 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 145 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 354 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 161 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 134 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 134 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 239 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 190 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 140 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 148 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 144 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 150 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 333 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 341 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 268 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 323 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 53 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 211 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 175 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 172 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 251 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 124 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 282 bp overlap
ChIP epididymis_HEE_R1881 GSE109061.AR.epididymis_HEE_R1881 145 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 199 bp overlap
ChIP prostate GSE65478.AR.prostate 194 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 184 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 144 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 242 bp overlap
BRD4 1 dataset
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 224 bp overlap
CCAR2 1 dataset
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 165 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 215 bp overlap
CHD4 2 datasets
ChIP A-549 ENCSR550SCU.CHD4.A-549 175 bp overlap
ChIP A549 ENCFF005TEA 96 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 107 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 149 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 164 bp overlap
ESR1 13 datasets
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 373 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 218 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 131 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 189 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 169 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 414 bp overlap
ChIP T-47D GSE74033.ESR1.T-47D 224 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 223 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 402 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 161 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 163 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 339 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 361 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 295 bp overlap
FOXA1 8 datasets
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 119 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 216 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 163 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 71 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 123 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 109 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 208 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 199 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 405 bp overlap
ChIP DE DE-FOXA2-2 392 bp overlap
ChIP HepG2 ENCFF533COJ 200 bp overlap
ChIP HepG2 ENCFF894AYY 273 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 115 bp overlap
GATA2 1 dataset
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 144 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 331 bp overlap
ChIP DE DE-GATA4-2 393 bp overlap
ChIP foregut GSE117136.GATA4.foregut 230 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 361 bp overlap
ChIP DE DE-GATA6-2 416 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 192 bp overlap
ChIP foregut GSE117136.GATA6.foregut 268 bp overlap
GATAD2A 2 datasets
ChIP HepG2 ENCFF252XNH 289 bp overlap
ChIP HepG2 ENCFF252XNH 75 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 416 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 416 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 255 bp overlap
GRHL2 3 datasets
ChIP LNCaP GSE80256.GRHL2.LNCaP 170 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 159 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 120 bp overlap
HDAC2 1 dataset
ChIP A549 ENCFF195CCI 80 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 252 bp overlap
HMG20B 1 dataset
ChIP HepG2 ENCFF756WYV 272 bp overlap
HOXB13 3 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 68 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 110 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 129 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 181 bp overlap
KAT8 1 dataset
ChIP HepG2 ENCFF890JFC 416 bp overlap
KDM1A 2 datasets
ChIP HepG2 ENCFF240UWG 53 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 67 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 291 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 209 bp overlap
ChIP HepG2 ENCFF507HCX 337 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 185 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 205 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 171 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 133 bp overlap
PGR 7 datasets
ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 187 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 297 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 273 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 156 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 208 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 262 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 189 bp overlap
POLR2A 1 dataset
ChIP gastrocnemius medialis ENCFF145VIB 213 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 179 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 139 bp overlap
RREB1 1 dataset
ChIP HepG2 ENCFF986CSN 114 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 385 bp overlap
SFPQ 1 dataset
ChIP HepG2 ENCFF145CDF 83 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 372 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 198 bp overlap
SOX13 2 datasets
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 171 bp overlap
ChIP HepG2 ENCFF062VSQ 127 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 235 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 381 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 361 bp overlap
ChIP HepG2 ENCFF767OCK 371 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 159 bp overlap
STAT3 5 datasets
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 261 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 151 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 163 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 174 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 156 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 140 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 144 bp overlap
ZNF12 1 dataset
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 105 bp overlap
ZNF556 1 dataset
ChIP HepG2 ENCFF008WIK 403 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 50 bp overlap