chr1 : 213,519,131 213,519,364
233 bp 52 TFs 0 linked genes
This 233 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:213,514,131 – 213,524,364
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AR 5 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 228 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 189 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 145 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 233 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 80 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 233 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 233 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 233 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 228 bp overlap
BRD4 5 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 214 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 233 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 233 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 233 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 168 bp overlap
ESR1 1 dataset
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 200 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 120 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 219 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 116 bp overlap
FOXA1 3 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 181 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 233 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 101 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 233 bp overlap
ChIP DE DE-FOXA2-2 233 bp overlap
ChIP HepG2 ENCFF570ABM 233 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 233 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 188 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 105 bp overlap
GATA3 1 dataset
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 64 bp overlap
GATA4 3 datasets
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 221 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 233 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 233 bp overlap
GATA6 8 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 233 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 233 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 233 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 209 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 233 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 233 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 229 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 233 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 225 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 233 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 233 bp overlap
HOXB13 1 dataset
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 233 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 233 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 224 bp overlap
MAX 1 dataset
ChIP NCI-H128 GSE41105.MAX.NCI-H128 157 bp overlap
MED25 1 dataset
ChIP PC-3_FLAG GSE133445.MED25.PC-3_FLAG 170 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 233 bp overlap
MYCN 2 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 233 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 153 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 204 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 139 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 199 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 233 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 233 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 189 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 212 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 130 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 233 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 233 bp overlap
RFX1 4 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 233 bp overlap
ChIP K562 ENCFF421AVO 233 bp overlap
ChIP MCF-7 ENCFF973QAD 233 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 179 bp overlap
RFX3 1 dataset
ChIP Hep-G2 ENCSR633OVO.RFX3.Hep-G2 152 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 233 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 233 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 233 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 229 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 233 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 233 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 156 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 103 bp overlap
TCF7L2 3 datasets
ChIP HEK293 ENCFF513JQN 233 bp overlap
ChIP HEK293 ENCFF513JQN 118 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 233 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF582MWI 233 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 233 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 233 bp overlap
USP7 1 dataset
ChIP HEK293T GSE61048.USP7.HEK293T 128 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 233 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 233 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 113 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 233 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 214 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 233 bp overlap
ZNF549 2 datasets
ChIP HEK293 ENCSR185QFX.ZNF549.HEK293 210 bp overlap
ChIP HEK293 GSE76494.ZNF549.HEK293 184 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 180 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 212 bp overlap