chr11 : 27,599,267 – 27,599,546
279 bp 57 TFs 0 linked genes
This 279 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:27,594,267 – 27,604,546
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 229 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 219 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 214 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 121 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 207 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 117 bp overlap
CTCF 75 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 212 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 124 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 279 bp overlap
ChIP A673 ENCFF123WOM 279 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 146 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 169 bp overlap
ChIP GM23338 ENCFF531QOI 213 bp overlap
ChIP GM23338 ENCFF772DML 188 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 216 bp overlap
ChIP H1 ENCFF764RHO 162 bp overlap
ChIP H9 ENCFF152GTF 243 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 235 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 179 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 165 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 222 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 197 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 172 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 250 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 277 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 127 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 147 bp overlap
ChIP HCT116 ENCFF373YMA 279 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 149 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 177 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 68 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 196 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 131 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 279 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 279 bp overlap
ChIP MCF-7 ENCFF198DQX 199 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF494VXA 199 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 111 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 125 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 241 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 215 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 150 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 279 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 279 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 279 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 224 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 260 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 175 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 171 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 279 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 208 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 189 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 185 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 185 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 119 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 251 bp overlap
ChIP endodermal cell ENCFF471YCZ 241 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 279 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 279 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 145 bp overlap
ChIP hESC GSE20650.CTCF.hESC 146 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 182 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 185 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 191 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 191 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 209 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 239 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 220 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 261 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 175 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 249 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 166 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 205 bp overlap
ChIP neural progenitor cell ENCFF420RBO 103 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 279 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 126 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 266 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 239 bp overlap
ChIP BLaER1 ENCFF335XTP 215 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 279 bp overlap
Gli1 1 dataset
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 184 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 220 bp overlap
MAX 5 datasets
ChIP H1 ENCFF601FOM 100 bp overlap
ChIP H1 ENCFF914VQY 185 bp overlap
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 124 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 233 bp overlap
ChIP WTC11 ENCFF223QFY 279 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 152 bp overlap
MTF1 2 datasets
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
Motif ES_0h ES_0h-MTF1_MA0863.1 14 bp overlap
MXI1 4 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
ChIP H1 ENCFF963FZS 279 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 204 bp overlap
MYC 3 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 105 bp overlap
ChIP H1 ENCFF794ZJT 265 bp overlap
ChIP WA01 ENCSR000EBY.MYC.WA01 148 bp overlap
MYCN 1 dataset
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 79 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 215 bp overlap
NFIA 4 datasets
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIX 4 datasets
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
NFYA 2 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif ES_0h ES_0h-NFYA_MA0060.4 8 bp overlap
NFYC 2 datasets
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
Motif ES_0h ES_0h-NFYC_MA1644.2 7 bp overlap
NKX2-4 1 dataset
Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif ES_0h ES_0h-NKX2-8_MA0673.2 8 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Nkx2-1 1 dataset
Motif ES_0h ES_0h-Nkx2-1_MA1994.2 7 bp overlap
PAX5 3 datasets
ChIP NALM-6 GSE126300.PAX5.NALM-6 279 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 206 bp overlap
ChIP OCI-Ly7 GSE69558.PAX5.OCI-Ly7 172 bp overlap
PBX3 2 datasets
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
PKNOX1 2 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 1 dataset
ChIP Raji ENCFF613VGX 198 bp overlap
Pparg::Rxra 2 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
RAD21 12 datasets
ChIP H1 ENCFF698EWO 124 bp overlap
ChIP H1 ENCFF967OJF 230 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 164 bp overlap
ChIP HCT116 ENCFF568PEO 255 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 121 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 267 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 279 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 238 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 232 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 264 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 187 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 238 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 215 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 279 bp overlap
RELB 2 datasets
Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap
Motif ES_0h ES_0h-RELB_MA1117.2 7 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 276 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 279 bp overlap
ChIP H1 ENCFF896IJG 246 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 211 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 149 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 226 bp overlap
SIX2 1 dataset
Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 148 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 164 bp overlap
TFAP4::ETV1 2 datasets
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap
TRIM28 1 dataset
ChIP WA01 GSE78099.TRIM28.WA01 89 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 123 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 275 bp overlap
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 120 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 159 bp overlap
ZBTB6 2 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZFP14 1 dataset
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZNF135 2 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF143 3 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 109 bp overlap
ZNF382 2 datasets
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
Motif ES_0h ES_0h-ZNF382_MA1594.1 24 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 218 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 145 bp overlap
ZSCAN31 2 datasets
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Motif ES_0h ES_0h-ZSCAN31_MA1722.2 18 bp overlap
Zfp335 3 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
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