chr11 : 20,497,226 – 20,497,860

634 bp 87 TFs 0 linked genes

This 634 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

87 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 158 bp overlap

ATF4 1 dataset

Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap

ATOH7 1 dataset

Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

CEBPG 1 dataset

Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap

CHD7 2 datasets

ChIP H1 ENCFF126NLU 382 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 144 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

EOMES 1 dataset

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 481 bp overlap

ChIP DE DE-FOXA2-2 433 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 146 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 275 bp overlap

ChIP DE DE-GATA4-2 365 bp overlap

GATA6 5 datasets

ChIP AGS GSE51936.GATA6.AGS 79 bp overlap

ChIP DE DE-GATA6-1 243 bp overlap

ChIP DE DE-GATA6-2 318 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 277 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 289 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HOXC10 1 dataset

Motif DE_12h DE_12h-HOXC10_MA0905.2 9 bp overlap

HOXC11 1 dataset

Motif DE_12h DE_12h-HOXC11_MA0651.3 11 bp overlap

HOXC12 1 dataset

Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap

HOXD10 1 dataset

Motif DE_12h DE_12h-HOXD10_MA1506.2 10 bp overlap

HOXD11 1 dataset

Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap

HOXD12 1 dataset

Motif DE_12h DE_12h-HOXD12_MA0873.2 10 bp overlap

Hic1 1 dataset

Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

Hoxa11 1 dataset

Motif DE_12h DE_12h-Hoxa11_MA0911.2 9 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 314 bp overlap

Lef1 1 dataset

Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap

MYOD1 1 dataset

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 444 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 327 bp overlap

ChIP hESC GSE18292.NANOG.hESC 166 bp overlap

NEUROD1 4 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 274 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 333 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 179 bp overlap

Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap

NHLH2 1 dataset

Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap

Nkx3-2 1 dataset

Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap

Nr5A2 1 dataset

Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap

OLIG1 1 dataset

Motif DE_12h DE_12h-OLIG1_MA0826.1 10 bp overlap

OSR1 1 dataset

Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU5F1 2 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 458 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Ptf1A 2 datasets

Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SFPQ 1 dataset

ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 165 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 328 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 241 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 346 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 332 bp overlap

SNAI2 1 dataset

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

SOX11 1 dataset

ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 99 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 117 bp overlap

STAT1 1 dataset

Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap

STAT3 1 dataset

Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap

Stat2 1 dataset

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

Stat4 1 dataset

Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap

Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

TAL1::TCF3 1 dataset

Motif DE_12h DE_12h-TAL1TCF3_MA0091.2 10 bp overlap

TBR1 1 dataset

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

TBX2 1 dataset

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

TBX20 1 dataset

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

TBX21 1 dataset

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

TBX5 1 dataset

Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 234 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 158 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 434 bp overlap

TCF7 1 dataset

Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap

TCF7L1 1 dataset

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZIM3 2 datasets

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF652 1 dataset

Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap

ZNF766 1 dataset

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap