chr11 : 15,875,794 – 15,876,451
657 bp 62 TFs 0 linked genes
This 657 bp open chromatin element has no linked target genes and is bound by 62 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:15,870,794 – 15,881,451
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 634 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 225 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 518 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 211 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000BLI.E2F6.K-562 127 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 240 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 657 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 249 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 228 bp overlap
FEZF2 1 dataset
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 184 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 577 bp overlap
ChIP DE DE-GATA4-2 600 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 445 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 493 bp overlap
ChIP DE DE-GATA6-2 508 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 624 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 657 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 657 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 649 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 657 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 657 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 615 bp overlap
ChIP foregut GSE117136.GATA6.foregut 491 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 656 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 392 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 606 bp overlap
GLIS3 3 datasets
Motif DE_36h DE_36h-GLIS3_MA0737.1 14 bp overlap
Motif DE_60h DE_60h-GLIS3_MA0737.1 14 bp overlap
ChIP H9_plus GSE109562.GLIS3.H9_plus 521 bp overlap
HOXA3 2 datasets
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
HOXA4 2 datasets
Motif DE_36h DE_36h-HOXA4_MA1496.2 7 bp overlap
Motif DE_60h DE_60h-HOXA4_MA1496.2 7 bp overlap
HOXA5 2 datasets
Motif DE_36h DE_36h-HOXA5_MA0158.2 8 bp overlap
Motif DE_60h DE_60h-HOXA5_MA0158.2 8 bp overlap
HOXB4 2 datasets
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
Motif DE_60h DE_60h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
Motif DE_60h DE_60h-HOXC4_MA1504.2 6 bp overlap
HOXD3 2 datasets
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
Motif DE_60h DE_60h-HOXD3_MA0912.2 8 bp overlap
HOXD4 2 datasets
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
Motif DE_60h DE_60h-HOXD4_MA1507.2 6 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 318 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 227 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
MXI1 1 dataset
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 527 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 277 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 249 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 124 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 469 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 552 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 141 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 450 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 423 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 318 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 383 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 299 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 443 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 341 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 318 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 286 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 370 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 623 bp overlap
SP5 3 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 235 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TBX1 2 datasets
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX2 2 datasets
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX3 2 datasets
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 208 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 499 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 422 bp overlap
ZIC1 2 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 299 bp overlap
ZIC4 2 datasets
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZKSCAN1 2 datasets
Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF16 2 datasets
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
ZNF280A 1 dataset
ChIP HEK293 GSE76494.ZNF280A.HEK293 216 bp overlap
ZNF324 2 datasets
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
ZNF460 1 dataset
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
ZNF530 1 dataset
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 361 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 261 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
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