chr10 : 124,739,557 – 124,739,910
353 bp 58 TFs 1 linked gene
This 353 bp open chromatin element is linked to FAM53B and is bound by 58 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
FAM53B 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:124,734,557 – 124,744,910
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 69 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 137 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 304 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 227 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 252 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 190 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 276 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 261 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 249 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 239 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 171 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 257 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 164 bp overlap
BRD4 3 datasets
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 245 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 236 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 169 bp overlap
CDK7 1 dataset
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 349 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 168 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 199 bp overlap
CREB3L4 1 dataset
Motif DE_12h DE_12h-CREB3L4_MA1475.2 9 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 231 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 185 bp overlap
ESR1 9 datasets
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 105 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 158 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 168 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 116 bp overlap
ChIP breast_tumor_Male_5 GSE104399.ESR1.breast_tumor_Male_5 160 bp overlap
ChIP breast_tumor_Male_7 GSE104399.ESR1.breast_tumor_Male_7 53 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 65 bp overlap
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 109 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 127 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 96 bp overlap
FOXA1 6 datasets
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 94 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 271 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 194 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 181 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 173 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 123 bp overlap
FOXA2 2 datasets
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 202 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 106 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 149 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 280 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 353 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 353 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 353 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 353 bp overlap
HNRNPH1 1 dataset
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 158 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 60 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 331 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 350 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 353 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 317 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 353 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KMT2A 2 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 211 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 313 bp overlap
NANOG 7 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 325 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 129 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 322 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 271 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 310 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 75 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 196 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
PGR 1 dataset
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 52 bp overlap
POLR2A 1 dataset
ChIP tibial nerve ENCFF983HAU 95 bp overlap
POU5F1 6 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 304 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 346 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 353 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 177 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 353 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 252 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 302 bp overlap
RNF2 1 dataset
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 223 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE42575.RUNX1.Jurkat 100 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 120 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 182 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 353 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 353 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 337 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 319 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 297 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 197 bp overlap
SMARCA4 9 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 78 bp overlap
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 210 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 123 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 79 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 109 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 211 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 353 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 291 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 292 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 265 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 177 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 211 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 279 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 272 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 278 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 187 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 161 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 225 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 289 bp overlap
TP53 1 dataset
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 307 bp overlap
YY1 1 dataset
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 105 bp overlap
ZMYM3 1 dataset
ChIP HepG2 ENCFF408KTI 78 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
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