chr1 : 193,542,634 – 193,543,001

367 bp 65 TFs 0 linked genes

This 367 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

65 transcription factors

AR 1 dataset

ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 107 bp overlap

ARID2 3 datasets

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 210 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 240 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 266 bp overlap

ARNT::HIF1A 1 dataset

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 317 bp overlap

BACH1 1 dataset

ChIP WA01 ENCSR000EBQ.BACH1.WA01 147 bp overlap

BHLHE22 2 datasets

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap

BRD4 1 dataset

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 192 bp overlap

Bhlha15 1 dataset

Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap

CEBPA 2 datasets

ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 171 bp overlap

ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 58 bp overlap

CEBPB 2 datasets

ChIP WA01 ENCSR000EBV.CEBPB.WA01 155 bp overlap

ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 157 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 179 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 156 bp overlap

ETV5::FOXO1 1 dataset

Motif ES_0h ES_0h-ETV5FOXO1_MA1947.2 10 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 69 bp overlap

FERD3L 2 datasets

Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap

Motif ES_0h ES_0h-FERD3L_MA1485.1 14 bp overlap

FOXA1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 203 bp overlap

FOXA2 4 datasets

ChIP Caco-2 GSE66218.FOXA2.Caco-2 151 bp overlap

ChIP DE DE-FOXA2-1 367 bp overlap

ChIP DE DE-FOXA2-2 367 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 278 bp overlap

GATA4 2 datasets

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 349 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 263 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 204 bp overlap

HIF1A 1 dataset

ChIP macrophage_HYPO_IL GSE43109.HIF1A.macrophage_HYPO_IL 77 bp overlap

HNF4A 1 dataset

ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap

IRF3 1 dataset

Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap

Irf1 1 dataset

Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap

MAF 1 dataset

ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 317 bp overlap

MAX 1 dataset

ChIP P493-6 GSE36354.MAX.P493-6 149 bp overlap

MSC 1 dataset

Motif ES_0h ES_0h-MSC_MA0665.1 10 bp overlap

MYC 1 dataset

ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 297 bp overlap

MYF5 1 dataset

Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap

MYOD1 1 dataset

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 196 bp overlap

MYOG 1 dataset

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

NEUROD1 1 dataset

Motif ES_0h ES_0h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 192 bp overlap

Neurod2 3 datasets

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Motif ES_0h ES_0h-Neurod2_MA0668.3 8 bp overlap

Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap

Olig2 2 datasets

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 263 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm4 1 dataset

Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap

Ptf1A 1 dataset

Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 130 bp overlap

REST 1 dataset

Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap

RFX7 1 dataset

Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap

SMARCA4 3 datasets

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 315 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 367 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 317 bp overlap

SMARCB1 1 dataset

ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 209 bp overlap

SMARCC1 3 datasets

ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 223 bp overlap

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 252 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 367 bp overlap

SPI1 5 datasets

ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 128 bp overlap

ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 168 bp overlap

ChIP monocyte GSE31621.SPI1.monocyte 116 bp overlap

ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 95 bp overlap

ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 135 bp overlap

SS18 2 datasets

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 275 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 218 bp overlap

STAT1 1 dataset

ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 87 bp overlap

STAT3 3 datasets

ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 117 bp overlap

ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 137 bp overlap

ChIP monocyte_resting GSE120943.STAT3.monocyte_resting 155 bp overlap

STAT5A 1 dataset

ChIP MV4-11 GSE64862.STAT5A.MV4-11 143 bp overlap

Stat2 1 dataset

Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap

TAL1::TCF3 1 dataset

Motif ES_0h ES_0h-TAL1TCF3_MA0091.2 10 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 151 bp overlap

TCF4 1 dataset

ChIP GEN2-2 GSE76147.TCF4.GEN2-2 191 bp overlap

TEAD1 1 dataset

ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 169 bp overlap

TEAD4 1 dataset

ChIP H1 ENCFF778PAX 245 bp overlap

TFAP4 1 dataset

Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap

Tcf12 2 datasets

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap

Tcf21 1 dataset

Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap

Twist2 2 datasets

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 121 bp overlap

ZBTB12 1 dataset

Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap

ZNF418 1 dataset

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 289 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap

Zic2 1 dataset

Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap