chr10 : 52,020,606 – 52,021,222

616 bp 99 TFs 0 linked genes

This 616 bp open chromatin element has no linked target genes and is bound by 99 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

99 transcription factors

ARGFX 1 dataset

Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 135 bp overlap

Arid3a 1 dataset

Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap

Arx 1 dataset

Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BRD4 2 datasets

ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 448 bp overlap

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 545 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

CREB1 2 datasets

ChIP WTC11 ENCFF297VCI 371 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap

E2F6 4 datasets

ChIP H1 ENCFF785DWK 191 bp overlap

ChIP H1 ENCFF785DWK 353 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 323 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 206 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELF2 1 dataset

Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap

ELF3 1 dataset

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

ELF4 1 dataset

Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap

ELK4 1 dataset

Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap

ESRRA 2 datasets

ChIP BT-474 GSE81651.ESRRA.BT-474 114 bp overlap

ChIP WTC11 ENCFF591YCA 311 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 437 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

GATA6 1 dataset

ChIP DE_D1 S41-DE-d1-GATA6-exp2 275 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

Hmga1 1 dataset

Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

Irf1 1 dataset

Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LDB1 1 dataset

ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 259 bp overlap

LHX2 1 dataset

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

MAFF 1 dataset

Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap

MAX 4 datasets

ChIP H1 ENCFF601FOM 142 bp overlap

ChIP H1 ENCFF914VQY 170 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 220 bp overlap

ChIP WTC11 ENCFF223QFY 554 bp overlap

MGA::EVX1 1 dataset

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

MYF6 1 dataset

Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap

MYOD1 2 datasets

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 205 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NANOG 5 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 551 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 199 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 250 bp overlap

NFIA 2 datasets

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

NFIX 2 datasets

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap

PGR 1 dataset

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 160 bp overlap

POLR2A 2 datasets

ChIP GM23338 ENCFF450WCS 426 bp overlap

ChIP H1 ENCFF770YBQ 346 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 555 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 295 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

PRRX2 1 dataset

ChIP WTC11 ENCFF107JGJ 242 bp overlap

Pax7 1 dataset

Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

REST 1 dataset

Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap

SCRT1 3 datasets

Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap

ChIP HEK293 ENCFF513YVP 417 bp overlap

ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 470 bp overlap

SCRT2 2 datasets

Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap

ChIP HEK293 ENCFF711QQB 397 bp overlap

SIN3A 1 dataset

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 149 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 403 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 303 bp overlap

SNAI2 1 dataset

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 182 bp overlap

SOX21 1 dataset

Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap

Sox1 1 dataset

Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap

TAL1 1 dataset

ChIP PRIMA2 GSE33850.TAL1.PRIMA2 149 bp overlap

TBX5 1 dataset

Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 251 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 113 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 227 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 405 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 239 bp overlap

TRIM28 2 datasets

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 283 bp overlap

ChIP hESC GSE115387.TRIM28.hESC 241 bp overlap

Tbx6 1 dataset

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 386 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 417 bp overlap

ZBTB7C 1 dataset

Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 449 bp overlap

ZNF416 1 dataset

ChIP WTC11 ENCFF407TAZ 271 bp overlap

ZNF44 1 dataset

ChIP HEK293T GSE78099.ZNF44.HEK293T 118 bp overlap

ZNF528 1 dataset

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

ZNF547 1 dataset

Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap