chr10 : 30,068,640 30,069,018
378 bp 67 TFs 1 linked gene
This 378 bp open chromatin element is linked to JCAD and is bound by 67 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
JCAD 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:30,063,640 – 30,074,018
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 378 bp overlap
ATXN7L3 1 dataset
ChIP HCT-116_thaps GSE121798.ATXN7L3.HCT-116_thaps 317 bp overlap
BRD4 3 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 215 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 198 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 221 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 102 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 167 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 180 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 251 bp overlap
DAXX 2 datasets
ChIP PC-3 GSE68647.DAXX.PC-3 107 bp overlap
ChIP PC-3 GSE68647.DAXX.PC-3 91 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 172 bp overlap
EGR1 1 dataset
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 207 bp overlap
ELF3 1 dataset
ChIP PDAC GSE64557.ELF3.PDAC 274 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 190 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 242 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 246 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 175 bp overlap
FOS 3 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 378 bp overlap
ChIP MCF-7 ENCFF282FWZ 127 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 66 bp overlap
FOSL1 1 dataset
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 54 bp overlap
FOXA1 7 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 378 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 378 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 378 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 378 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 282 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 378 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 225 bp overlap
FOXA2 12 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 235 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 378 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 378 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 327 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 378 bp overlap
ChIP DE DE-FOXA2-1 378 bp overlap
ChIP DE DE-FOXA2-2 378 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 378 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 378 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 378 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 279 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 259 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 161 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 378 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 308 bp overlap
ChIP DE DE-GATA4-2 378 bp overlap
ChIP foregut GSE117136.GATA4.foregut 216 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 378 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 378 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 335 bp overlap
ChIP DE DE-GATA6-2 378 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 256 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 378 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 281 bp overlap
ChIP foregut GSE117136.GATA6.foregut 270 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 241 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 378 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 281 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 322 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 130 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 378 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 240 bp overlap
HOXB8 2 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 205 bp overlap
ChIP PANC-1 GSE119930.HOXB8.PANC-1 378 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 354 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 165 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 378 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 184 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 378 bp overlap
ChIP HAEC GSE89970.JUNB.HAEC 172 bp overlap
JUND 2 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 53 bp overlap
ChIP HCT116 ENCFF748ZQX 160 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 374 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 291 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 378 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 378 bp overlap
MED1 4 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 336 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 325 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 212 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 249 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 101 bp overlap
ChIP K562 ENCFF320GSD 143 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_alpha-amanitin-1H GSE118494.NCAPH2.IMR-90_alpha-amanitin-1H 189 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 57 bp overlap
PDX1 5 datasets
ChIP hESC GSE58685.PDX1.hESC 148 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 252 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 217 bp overlap
ChIP islet ERP001456.PDX1.islet 101 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 378 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 51 bp overlap
POLR2A 1 dataset
ChIP HCT116 ENCFF508RDJ 187 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
RAD21 1 dataset
ChIP HCT116 ENCFF568PEO 160 bp overlap
RELA 2 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 67 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 116 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 68 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 377 bp overlap
SMAD3 2 datasets
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 139 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 146 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 204 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 59 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 112 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 63 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 95 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 355 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 60 bp overlap
ChIP HCT116 ENCFF800LBN 204 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 149 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_6aa GSE139053.SS18-SSX.fibroblast_6aa 172 bp overlap
SUZ12 1 dataset
ChIP K-562 ENCSR412CTM.SUZ12.K-562 147 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 193 bp overlap
TCF7L2 4 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 144 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 141 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 378 bp overlap
ChIP Panc1 ENCFF829HHL 302 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 153 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 364 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 161 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 73 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 378 bp overlap