chr10 : 3,681,699 3,682,440
741 bp 71 TFs 0 linked genes
This 741 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:3,676,699 – 3,687,440
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 327 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 339 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 306 bp overlap
BCL11A 1 dataset
Motif DE_36h DE_36h-BCL11A_MA2324.1 7 bp overlap
BRD2 2 datasets
ChIP NCI-H23 GSE113714.BRD2.NCI-H23 454 bp overlap
ChIP NCI-H23 GSE104481.BRD2.NCI-H23 426 bp overlap
BRD4 3 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 231 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 186 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 331 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 385 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 167 bp overlap
CTCF 51 datasets
ChIP D54 ENCSR000DKN.CTCF.D54 116 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 90 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 115 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 104 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 122 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 107 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 231 bp overlap
ChIP astrocyte ENCFF042YJV 158 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 182 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 208 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 159 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 128 bp overlap
ChIP body of pancreas ENCFF269EDN 108 bp overlap
ChIP body of pancreas ENCFF438KTE 270 bp overlap
ChIP body of pancreas ENCFF798MEO 177 bp overlap
ChIP body of pancreas ENCFF881RGF 59 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 164 bp overlap
ChIP chondrocyte ENCFF134ORZ 163 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 180 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 157 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 158 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 102 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF255MAF 148 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 136 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 143 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 130 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 116 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 83 bp overlap
ChIP islet ERP004003.CTCF.islet 161 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 180 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 146 bp overlap
ChIP liver ENCFF895ERR 147 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 143 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 174 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 107 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 174 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 121 bp overlap
ChIP pancreas ENCFF101CZV 126 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 89 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 202 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 194 bp overlap
ChIP pancreas_body ENCSR307PFP.CTCF.pancreas_body 182 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 116 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 227 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 157 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 123 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 244 bp overlap
ChIP right lobe of liver ENCFF523SCB 280 bp overlap
ChIP right lobe of liver ENCFF956UTA 202 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 128 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 275 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 242 bp overlap
ChIP BLaER1 ENCFF274GAT 305 bp overlap
EGR3 1 dataset
Motif DE_36h DE_36h-EGR3_MA0732.2 11 bp overlap
EOMES 2 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 281 bp overlap
ESR1 4 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 224 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 371 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 386 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 542 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 431 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 388 bp overlap
ChIP liver ERP002306.FOXA1.liver 73 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 78 bp overlap
ChIP DE DE-FOXA2-1 269 bp overlap
ChIP DE DE-FOXA2-2 323 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 303 bp overlap
ChIP DE DE-GATA4-2 357 bp overlap
ChIP DE DE-GATA4-2 152 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 437 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 462 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 453 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 429 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 575 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 491 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 541 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 463 bp overlap
Hic1 1 dataset
Motif DE_36h DE_36h-Hic1_MA0739.2 8 bp overlap
JUN 4 datasets
ChIP 786-O GSE86092.JUN.786-O 178 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 440 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 431 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 227 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 286 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 313 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 210 bp overlap
MGA 1 dataset
Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 123 bp overlap
NHLH1 1 dataset
Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 337 bp overlap
ONECUT1 5 datasets
ChIP H9 ERP004206.ONECUT1.H9 249 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 213 bp overlap
ChIP HepG2 ENCFF243FIR 252 bp overlap
ChIP liver ERP002306.ONECUT1.liver 199 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 339 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 222 bp overlap
PLAG1 1 dataset
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 351 bp overlap
Ptf1A 1 dataset
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
RAD21 10 datasets
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 103 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 104 bp overlap
ChIP HepG2 ENCFF963UBJ 156 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 99 bp overlap
ChIP K562 ENCFF169SQI 144 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 303 bp overlap
ChIP liver ENCFF289RIE 176 bp overlap
ChIP liver ENCFF485PAC 291 bp overlap
ChIP liver ENCFF522JHE 167 bp overlap
ChIP liver ENCSR635OSG.RAD21.liver 171 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 384 bp overlap
SCRT2 1 dataset
Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 278 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 512 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 620 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 403 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 512 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 563 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 345 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 386 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 135 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 435 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 97 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 697 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 211 bp overlap
STAG1 2 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 144 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 144 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 172 bp overlap
TBR1 1 dataset
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
TBX4 1 dataset
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
TFAP4 1 dataset
Motif DE_36h DE_36h-TFAP4_MA0691.1 10 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
ZBED4 1 dataset
Motif DE_36h DE_36h-ZBED4_MA2328.1 10 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 388 bp overlap
ZNF213 1 dataset
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF317 1 dataset
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap