chr9 : 117,926,398 – 117,926,544

146 bp 56 TFs 1 linked gene

This 146 bp open chromatin element is linked to ENSG00000289735 and is bound by 56 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000289735		8.3 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

56 transcription factors

Atf3 1 dataset

Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap

BACH1 1 dataset

Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap

BACH2 1 dataset

Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap

BATF 1 dataset

Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap

BNC2 2 datasets

Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 84 bp overlap

BRD4 3 datasets

ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 144 bp overlap

ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 123 bp overlap

ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 123 bp overlap

BRD9 1 dataset

ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 100 bp overlap

CBX1 1 dataset

ChIP DKO GSE135580.CBX1.DKO 146 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 146 bp overlap

CREB1 1 dataset

ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 146 bp overlap

EP300 1 dataset

ChIP neural ENCSR843ZUP.EP300.neural 83 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF018MKA 146 bp overlap

FOS 7 datasets

Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap

ChIP HeLa-S3 ENCFF829XRF 146 bp overlap

ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 146 bp overlap

ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 146 bp overlap

ChIP MCF-7 ENCFF282FWZ 146 bp overlap

ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 146 bp overlap

ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 146 bp overlap

FOS::JUN 1 dataset

Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap

FOS::JUNB 1 dataset

Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap

FOS::JUND 1 dataset

Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap

FOSB::JUNB 1 dataset

Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap

FOSL1 1 dataset

Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap

FOSL1::JUN 1 dataset

Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUNB 1 dataset

Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap

FOSL1::JUND 1 dataset

Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap

FOSL2 3 datasets

Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap

ChIP LPS141 GSE111253.FOSL2.LPS141 146 bp overlap

ChIP NPC GSE122631.FOSL2.NPC 146 bp overlap

FOSL2::JUN 1 dataset

Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap

FOSL2::JUNB 1 dataset

Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap

FOSL2::JUND 1 dataset

Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap

ISL1 1 dataset

ChIP SK-N-SH ENCFF285GEQ 146 bp overlap

JDP2 1 dataset

Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap

JUN 6 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 146 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 146 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 146 bp overlap

ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 139 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 146 bp overlap

ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 135 bp overlap

JUN::JUNB 1 dataset

Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap

JUNB 2 datasets

Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap

ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 97 bp overlap

JUND 8 datasets

Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap

ChIP H1 ENCFF010YXS 146 bp overlap

ChIP HeLa-S3 ENCFF642OHL 146 bp overlap

ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 146 bp overlap

ChIP HepG2 ENCFF869OPW 146 bp overlap

ChIP SK-N-SH ENCFF971JKN 146 bp overlap

ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 141 bp overlap

ChIP WA01 ENCSR000EBZ.JUND.WA01 146 bp overlap

Jun 1 dataset

Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap

LHX2 1 dataset

ChIP retina_pigment GSE60024.LHX2.retina_pigment 139 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 1 dataset

Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap

NANOG 1 dataset

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 146 bp overlap

NFE2 1 dataset

Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap

NFKB1 1 dataset

ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 120 bp overlap

OTX2 1 dataset

ChIP retina_pigment GSE60024.OTX2.retina_pigment 146 bp overlap

POU5F1 1 dataset

ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 115 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 114 bp overlap

ChIP neural cell ENCFF882LXX 146 bp overlap

SIX2 1 dataset

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

SMARCA2 1 dataset

ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 146 bp overlap

SMARCA4 3 datasets

ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 73 bp overlap

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 146 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 146 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 146 bp overlap

Sox11 1 dataset

Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap

TEAD1 1 dataset

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

TEAD2 1 dataset

Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap

TEAD3 1 dataset

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

TEAD4 1 dataset

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

ZFP3 1 dataset

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 146 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap