chr9 : 110,172,538 110,173,150
612 bp 61 TFs 0 linked genes
This 612 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:110,167,538 – 110,178,150
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 235 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 324 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 302 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 137 bp overlap
BRD4 8 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 234 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 343 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 428 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 141 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 202 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 401 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 266 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
CDK7 1 dataset
ChIP Jurkat GSE50622.CDK7.Jurkat 232 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 315 bp overlap
CTCF 8 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 172 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 192 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 233 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 193 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 184 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 97 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 279 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 110 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 332 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 203 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 264 bp overlap
EZH2 1 dataset
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 152 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 269 bp overlap
FOXA1 1 dataset
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 111 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 329 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 339 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 142 bp overlap
KMT2A 2 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 269 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 220 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 281 bp overlap
MED1 2 datasets
ChIP Jurkat GSE59657.MED1.Jurkat 251 bp overlap
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 95 bp overlap
MITF 1 dataset
ChIP K562 ENCFF731XJJ 425 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 165 bp overlap
MYB 5 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 259 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 77 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 398 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 85 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 89 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 314 bp overlap
NFIA 2 datasets
ChIP HepG2 ENCFF815HWK 351 bp overlap
ChIP K-562 GSE97661.NFIA.K-562 235 bp overlap
NFIB 3 datasets
ChIP MCF-7 ENCFF925CGH 382 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 287 bp overlap
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 267 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 363 bp overlap
ChIP K562 ENCFF167YID 341 bp overlap
NR3C1 4 datasets
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 201 bp overlap
ChIP BEAS-2B_TNF-DEX_IA1 GSE125623.NR3C1.BEAS-2B_TNF-DEX_IA1 361 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 220 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 306 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
PML 1 dataset
ChIP GM12878 ENCSR000BQM.PML.GM12878 160 bp overlap
POLR2A 9 datasets
ChIP GM12878 ENCFF521FXC 230 bp overlap
ChIP GM12878 ENCFF899QYP 233 bp overlap
ChIP GM12891 ENCFF127ICP 446 bp overlap
ChIP GM12891 ENCFF379FCI 362 bp overlap
ChIP GM12891 ENCFF379FCI 501 bp overlap
ChIP GM12892 ENCFF245LYF 447 bp overlap
ChIP GM18505 ENCFF311CYB 367 bp overlap
ChIP spleen ENCFF706IUS 504 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 383 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 168 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 173 bp overlap
PRDM10 3 datasets
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 151 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 105 bp overlap
ChIP K562 ENCFF740YLK 62 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 145 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 277 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 247 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 86 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 175 bp overlap
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 350 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 344 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 165 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 241 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 215 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 245 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SREBP2 3 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 307 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 438 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 102 bp overlap
SUPT5H 1 dataset
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 426 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 87 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 128 bp overlap
YY1 1 dataset
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 107 bp overlap
ZBTB40 1 dataset
ChIP GM12878 ENCFF346DYM 73 bp overlap
ZBTB7A 2 datasets
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 94 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 280 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 161 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 261 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 294 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 153 bp overlap