chr9 : 85,158,555 – 85,159,067
512 bp 54 TFs 1 linked gene
This 512 bp open chromatin element is linked to ENSG00000285556 and is bound by 54 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000285556 8.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:85,153,555 – 85,164,067
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AR 21 datasets
ChIP LNCaP GSE110655.AR.LNCaP 220 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 195 bp overlap
ChIP LNCaP_D226N_shFOXA1_Ethanol GSE128883.AR.LNCaP_D226N_shFOXA1_Ethanol 156 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 218 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 188 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 154 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 114 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 257 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 166 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 274 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 194 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 290 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 342 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 210 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 168 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 156 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 151 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 224 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 175 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 283 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 365 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 406 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 336 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 88 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 294 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 210 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF167CZS 188 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 119 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 180 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 148 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 272 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 335 bp overlap
ERG 2 datasets
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 263 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 200 bp overlap
ESR1 3 datasets
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 331 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 264 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 194 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 260 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 207 bp overlap
FOXA1 1 dataset
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 108 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 428 bp overlap
ChIP DE DE-FOXA2-2 405 bp overlap
GATA2 8 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 137 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 137 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 360 bp overlap
ChIP SH-SY5Y ENCFF485YIB 134 bp overlap
ChIP SK-N-SH ENCFF764OZD 310 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 337 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 312 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 320 bp overlap
GATA3 6 datasets
ChIP BE2C GSE65664.GATA3.BE2C 140 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 210 bp overlap
ChIP SH-SY5Y ENCFF475HYF 391 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 397 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 239 bp overlap
ChIP SK-N-SH ENCFF040SSB 92 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 512 bp overlap
ChIP DE DE-GATA4-2 512 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 224 bp overlap
ChIP foregut GSE117136.GATA4.foregut 378 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 278 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 275 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 265 bp overlap
ChIP DE DE-GATA6-1 512 bp overlap
ChIP DE DE-GATA6-2 512 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 317 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 399 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 387 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 512 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 461 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 340 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 204 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 379 bp overlap
ChIP foregut GSE117136.GATA6.foregut 373 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 93 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 417 bp overlap
HOXB13 1 dataset
ChIP LNCaP GSE56288.HOXB13.LNCaP 184 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 165 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 408 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 276 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 276 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 280 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 274 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 287 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 153 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 155 bp overlap
NFIB 3 datasets
ChIP MCF-7 ENCFF925CGH 161 bp overlap
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 464 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 426 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 169 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 280 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 325 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 147 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 366 bp overlap
ChIP HEK293 ENCFF145WQQ 140 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 193 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 299 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 144 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 427 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 264 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 467 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 328 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 61 bp overlap
ChIP A-549_AG15687 GSE132290.SMARCA4.A-549_AG15687 188 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 131 bp overlap
SMC3 6 datasets
ChIP HeLa GSE126990.SMC3.HeLa 143 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 143 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 143 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 168 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 384 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 276 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 438 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 204 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 185 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 311 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 191 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 191 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 290 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 182 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 311 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 94 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 374 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 512 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 139 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 139 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 310 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 218 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 343 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 58 bp overlap
ZNF513 1 dataset
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 432 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 272 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 512 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 378 bp overlap
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