chr9 : 18,605,807 18,606,188
381 bp 61 TFs 0 linked genes
This 381 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:18,600,807 – 18,611,188
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
ATF3 4 datasets
ChIP liver ENCFF375GID 315 bp overlap
ChIP liver ENCFF867MFZ 290 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 373 bp overlap
ChIP liver ENCSR205FOW.ATF3.liver 381 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 234 bp overlap
BRD4 7 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 352 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 201 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 348 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 219 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 211 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 342 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CEBPA 2 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 332 bp overlap
ChIP liver ERP002306.CEBPA.liver 229 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 338 bp overlap
CTCF 1 dataset
ChIP hepatocyte ERP000395.CTCF.hepatocyte 116 bp overlap
DMRTC2 1 dataset
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
EGR1 3 datasets
ChIP liver ENCFF130MBW 381 bp overlap
ChIP liver ENCSR736BUG.EGR1.liver 301 bp overlap
ChIP liver ENCSR290ZOS.EGR1.liver 232 bp overlap
EP300 3 datasets
ChIP stomach ENCFF818VAB 281 bp overlap
ChIP tibial nerve ENCFF346AYA 381 bp overlap
ChIP tibial nerve ENCFF952OPK 306 bp overlap
ESR1 7 datasets
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 381 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 357 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 381 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 379 bp overlap
ChIP VCaP_E2_ERA GSE43985.ESR1.VCaP_E2_ERA 273 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 308 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 381 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 306 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 324 bp overlap
FOXA1 3 datasets
ChIP liver ENCFF749ERP 271 bp overlap
ChIP liver ERP002306.FOXA1.liver 381 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 250 bp overlap
FOXA2 4 datasets
ChIP liver ENCFF877SFI 303 bp overlap
ChIP liver ENCFF888VJF 290 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 292 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 243 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GABPA 3 datasets
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
ChIP liver ENCFF500III 381 bp overlap
ChIP liver ENCSR038GMB.GABPA.liver 277 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 381 bp overlap
ChIP liver ENCFF449HPV 381 bp overlap
ChIP liver ERP002306.HNF4A.liver 373 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 193 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 267 bp overlap
JUND 5 datasets
ChIP liver ENCFF007WWT 319 bp overlap
ChIP liver ENCFF557PGE 288 bp overlap
ChIP liver ENCFF557PGE 370 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 380 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 344 bp overlap
MAX 4 datasets
ChIP liver ENCFF092GVW 381 bp overlap
ChIP liver ENCFF584QGB 381 bp overlap
ChIP liver ENCSR521IID.MAX.liver 373 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 381 bp overlap
MED1 3 datasets
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 173 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 237 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 315 bp overlap
MYCN 2 datasets
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 253 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 219 bp overlap
Msgn1 1 dataset
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 194 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 154 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NR2F2 4 datasets
ChIP liver ENCFF427MRU 376 bp overlap
ChIP liver ENCFF565JGD 232 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 381 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 362 bp overlap
NR3C1 5 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 129 bp overlap
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 344 bp overlap
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 247 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 145 bp overlap
ChIP LCL_DEX GSE45638.NR3C1.LCL_DEX 94 bp overlap
Nanog 1 dataset
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
PGR 1 dataset
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 272 bp overlap
POLR2A 5 datasets
ChIP breast epithelium ENCFF960NNA 371 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 337 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 216 bp overlap
ChIP sigmoid colon ENCFF725QFT 355 bp overlap
ChIP stomach ENCFF820WZN 316 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 166 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAD21 2 datasets
ChIP liver ENCFF485PAC 236 bp overlap
ChIP liver ENCFF522JHE 291 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
RELA 2 datasets
ChIP MCF-7_Veh GSE67295.RELA.MCF-7_Veh 166 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 135 bp overlap
REST 4 datasets
ChIP liver ENCFF240FWT 381 bp overlap
ChIP liver ENCFF577AZT 381 bp overlap
ChIP liver ENCSR867WPH.REST.liver 360 bp overlap
ChIP liver ENCSR893QWP.REST.liver 298 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 258 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 273 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 381 bp overlap
ChIP liver ENCFF807CIA 381 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 381 bp overlap
ChIP liver ENCFF769YSM 381 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 280 bp overlap
TWIST1 5 datasets
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 381 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 345 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 381 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 345 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
YY1 3 datasets
ChIP liver ENCFF400MBC 381 bp overlap
ChIP liver ENCFF515BWJ 381 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 381 bp overlap
ZBTB33 2 datasets
ChIP liver ENCFF592BJA 381 bp overlap
ChIP liver ENCSR516HUP.ZBTB33.liver 371 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 296 bp overlap