chr1 : 16,228,391 – 16,228,630
239 bp 58 TFs 3 linked genes
This 239 bp open chromatin element is linked to ANO7L1, ENSG00000288398, and CPLANE2 and is bound by 58 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ANO7L1 364 bp At TSS Proximity
ENSG00000288398 2.7 kb Proximal Proximity
CPLANE2 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:16,223,391 – 16,233,630
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 223 bp overlap
AGO1 3 datasets
ChIP K-562 ENCSR641BSL.AGO1.K-562 129 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 127 bp overlap
ChIP K562 ENCFF025NLP 239 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 239 bp overlap
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 57 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 200 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 213 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 84 bp overlap
BRD4 2 datasets
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 160 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CREB1 4 datasets
ChIP GM23338 ENCFF432ZEW 212 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 178 bp overlap
ChIP H1 ENCFF955PMP 196 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 99 bp overlap
CTCF 49 datasets
ChIP B cell ENCFF506FKC 239 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 156 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 239 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 124 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 162 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 239 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 88 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 97 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 126 bp overlap
ChIP GM23338 ENCFF772DML 158 bp overlap
ChIP H1 ENCFF414GZI 178 bp overlap
ChIP H9 ENCFF152GTF 99 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 156 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 143 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 166 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 149 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 110 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 108 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 139 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 123 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 90 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 90 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 64 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 108 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 82 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 120 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 140 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 118 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 133 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 141 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 222 bp overlap
ChIP K562 ENCFF082GOI 158 bp overlap
ChIP K562 ENCFF400DFR 141 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 76 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 157 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 116 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 127 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 81 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 185 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 239 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 179 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 114 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 129 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 155 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 129 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 239 bp overlap
ChIP neural progenitor cell ENCFF420RBO 239 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 186 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 192 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 170 bp overlap
ChIP K562 ENCFF739JDE 167 bp overlap
ChIP K562 ENCFF775HUO 82 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 169 bp overlap
ChIP K562 ENCFF136LTS 175 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 239 bp overlap
ETV5 1 dataset
ChIP K562 ENCFF336FFA 107 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 211 bp overlap
EZH2 7 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 239 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 239 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 182 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 170 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 133 bp overlap
ChIP neural progenitor cell ENCFF018MKA 239 bp overlap
ChIP neural progenitor cell ENCFF472NFV 239 bp overlap
EZH2_phosphoT487 1 dataset
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 74 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 134 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 182 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 102 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 111 bp overlap
HSF1 1 dataset
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 238 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 227 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 72 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 111 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 138 bp overlap
KDM4B 1 dataset
ChIP K-562 ENCSR642VZY.KDM4B.K-562 132 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 133 bp overlap
MAX 4 datasets
ChIP H1 ENCFF914VQY 174 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 109 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
ChIP WTC11 ENCFF223QFY 239 bp overlap
MAZ 2 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 142 bp overlap
ChIP K562 ENCFF333ZIV 149 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 239 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGJ.MYC.K-562 60 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 239 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 142 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 142 bp overlap
POLR2A 1 dataset
ChIP erythroblast ENCFF498VMR 239 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF648YPL 239 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 211 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 149 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 239 bp overlap
RAD21 5 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 90 bp overlap
ChIP H1 ENCFF698EWO 167 bp overlap
ChIP H1 ENCFF967OJF 175 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 137 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 139 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 151 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 151 bp overlap
RNF2 2 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 239 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 239 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 239 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 115 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 239 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 105 bp overlap
SMARCB1 1 dataset
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 126 bp overlap
SUZ12 2 datasets
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 62 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 239 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 59 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 233 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF584VSB 239 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 239 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 155 bp overlap
ChIP K562 ENCFF053XDV 239 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 97 bp overlap
ZBTB33 2 datasets
ChIP K562 ENCFF427SDV 146 bp overlap
ChIP K562 ENCFF875HLX 239 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 230 bp overlap
ZFX 2 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 122 bp overlap
ChIP K562 ENCFF536AJO 165 bp overlap
ZNF232 2 datasets
ChIP WTC11 ENCFF901BGD 239 bp overlap
ChIP WTC11 ENCFF901BGD 192 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 140 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 239 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 107 bp overlap
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