chr7 : 33,645,621 33,646,401
780 bp 58 TFs 0 linked genes
This 780 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:33,640,621 – 33,651,401
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 242 bp overlap
ATF4 1 dataset
Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1_UV GSE103125.BCL6.OCI-Ly1_UV 124 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 429 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 152 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 203 bp overlap
CEBPG 1 dataset
Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 211 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
DUX4 1 dataset
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Dux 1 dataset
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 347 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 154 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 264 bp overlap
FIGLA 1 dataset
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 316 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 338 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 545 bp overlap
ChIP DE DE-GATA4-2 626 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 533 bp overlap
ChIP DE DE-GATA6-2 687 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 472 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 591 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 374 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 508 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 553 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 241 bp overlap
ISL2 1 dataset
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 198 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 312 bp overlap
MYB 1 dataset
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 236 bp overlap
MYOG 2 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 174 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 166 bp overlap
Nkx3-2 1 dataset
Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
POU4F2 1 dataset
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 231 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 94 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 706 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 778 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 437 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 93 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 212 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 363 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 309 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 335 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 185 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 502 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 555 bp overlap
SS18 4 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 780 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 657 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 192 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 306 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 168 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TCF7L1 1 dataset
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
ZEB1 1 dataset
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZNF214 1 dataset
Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap
ZNF317 1 dataset
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
ZNF416 1 dataset
Motif DE_36h DE_36h-ZNF416_MA1979.2 10 bp overlap
ZNF85 1 dataset
Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap