chr6 : 126,625,127 – 126,625,296
169 bp 59 TFs 1 linked gene
This 169 bp open chromatin element is linked to YAP1P3 and is bound by 59 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
YAP1P3 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:126,620,127 – 126,630,296
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 4 datasets
ChIP A-375 GSE116189.AR.A-375 169 bp overlap
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 169 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 144 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 143 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 165 bp overlap
ATF4 1 dataset
Motif ES_0h ES_0h-ATF4_MA0833.3 10 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 136 bp overlap
CEBPG 1 dataset
Motif ES_0h ES_0h-CEBPG_MA1636.2 10 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 169 bp overlap
DMRTA1 1 dataset
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 95 bp overlap
DUX4 1 dataset
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
EBF3 1 dataset
Motif ES_0h ES_0h-EBF3_MA1637.2 9 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 169 bp overlap
EHMT2 5 datasets
ChIP A-549 ENCSR321BJQ.EHMT2.A-549 169 bp overlap
ChIP A549 ENCFF026GWM 169 bp overlap
ChIP HepG2 ENCFF004KYI 169 bp overlap
ChIP HepG2 ENCFF004KYI 169 bp overlap
ChIP K-562 ENCSR175EOM.EHMT2.K-562 169 bp overlap
ESR1 2 datasets
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 90 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 169 bp overlap
ESR2 1 dataset
Motif ES_0h ES_0h-ESR2_MA0258.2 15 bp overlap
Ebf2 1 dataset
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
FERD3L 1 dataset
Motif ES_0h ES_0h-FERD3L_MA1485.1 14 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 169 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 150 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 169 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 142 bp overlap
MYB 3 datasets
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 169 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 169 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 127 bp overlap
MYF6 1 dataset
Motif ES_0h ES_0h-MYF6_MA0667.1 10 bp overlap
NFATC3 1 dataset
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap
NR1D1 1 dataset
Motif ES_0h ES_0h-NR1D1_MA1531.2 14 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 108 bp overlap
Nfatc1 1 dataset
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
ONECUT1 1 dataset
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 152 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 145 bp overlap
RAD21 2 datasets
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 143 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 133 bp overlap
RB1 1 dataset
ChIP MCF-7_siGFP GSE98728.RB1.MCF-7_siGFP 148 bp overlap
REST 71 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 169 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 169 bp overlap
ChIP A549 ENCFF148AIS 169 bp overlap
ChIP A549 ENCFF148AIS 169 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP GM12878 ENCFF235NGC 169 bp overlap
ChIP GM12878 ENCFF943QPB 169 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 169 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 169 bp overlap
ChIP GM23338 ENCFF024TCL 169 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 169 bp overlap
ChIP GP5D GSE51234.REST.GP5D 169 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 169 bp overlap
ChIP H1 ENCFF203SWY 169 bp overlap
ChIP H1 ENCFF429RUE 169 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 169 bp overlap
ChIP HCT116 ENCFF929AYY 169 bp overlap
ChIP HEK293 ENCFF073DOT 169 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 169 bp overlap
ChIP HL-60 ENCFF589LOF 169 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 169 bp overlap
ChIP HeLa-S3 ENCFF911DTC 169 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 169 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 169 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF122AWR 169 bp overlap
ChIP HepG2 ENCFF800JSL 169 bp overlap
ChIP Ishikawa ENCFF456OHV 169 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 169 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 169 bp overlap
ChIP K-562 GSE70482.REST.K-562 169 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 169 bp overlap
ChIP K562 ENCFF430APM 169 bp overlap
ChIP K562 ENCFF688UKW 169 bp overlap
ChIP K562 ENCFF758CZL 169 bp overlap
ChIP K562 ENCFF758CZL 169 bp overlap
ChIP MCF-7 ENCFF893RRD 169 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 169 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 169 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 169 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 169 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 169 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 160 bp overlap
ChIP PFSK-1 ENCFF668WMP 157 bp overlap
ChIP PFSK-1 ENCFF845VHA 169 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 169 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 169 bp overlap
ChIP Panc1 ENCFF338WSQ 169 bp overlap
ChIP Panc1 ENCFF518EEQ 169 bp overlap
ChIP Panc1 ENCFF629OJO 169 bp overlap
ChIP SK-N-SH ENCFF635KBN 169 bp overlap
ChIP SK-N-SH ENCFF861MKH 123 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 169 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 169 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 169 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 169 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 169 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 169 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 169 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 169 bp overlap
ChIP hepatocyte ERP000395.REST.hepatocyte 103 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 169 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 169 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 169 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 169 bp overlap
ChIP liver ENCFF240FWT 169 bp overlap
ChIP liver ENCFF577AZT 169 bp overlap
ChIP liver ENCSR867WPH.REST.liver 169 bp overlap
ChIP liver ENCSR893QWP.REST.liver 169 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 169 bp overlap
ChIP neural ENCSR000BTV.REST.neural 161 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 128 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 165 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 169 bp overlap
SMARCA4 11 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 144 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 98 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 169 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 169 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 169 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 169 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 169 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 169 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 169 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 169 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 169 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 158 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 169 bp overlap
SMARCC1 4 datasets
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 169 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 169 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 169 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 169 bp overlap
SMARCD3 1 dataset
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 169 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 169 bp overlap
SP140L 1 dataset
ChIP Hep-G2 ENCSR107DKT.SP140L.Hep-G2 159 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 102 bp overlap
SPDEF 2 datasets
ChIP MCF-7 ENCFF827PZY 169 bp overlap
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 139 bp overlap
TEAD4 3 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 169 bp overlap
ChIP A549 ENCFF243FTL 155 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 137 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 160 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 169 bp overlap
WIZ 1 dataset
ChIP HepG2 ENCFF559CYZ 169 bp overlap
YY1 1 dataset
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 126 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 133 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 169 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 157 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF35 1 dataset
Motif ES_0h ES_0h-ZNF35_MA2333.1 7 bp overlap
ZNF454 1 dataset
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 103 bp overlap
ZNF528 1 dataset
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
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