chr6 : 118,313,188 – 118,314,265

1,077 bp 82 TFs 0 linked genes

This 1.1 kb open chromatin element has no linked target genes and is bound by 82 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

82 transcription factors

AR 2 datasets

ChIP fibroblast_prostate-cancer_PCDF2 GSE126852.AR.fibroblast_prostate-cancer_PCDF2 232 bp overlap

ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 338 bp overlap

ASCL1 1 dataset

Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap

Ascl2 1 dataset

Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 1 dataset

Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap

Bhlha15 1 dataset

Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap

CDK8 3 datasets

ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 105 bp overlap

ChIP leiomyoma_PT916 GSE128230.CDK8.leiomyoma_PT916 55 bp overlap

ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 59 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 293 bp overlap

CLOCK 1 dataset

ChIP U2OS GSE44236.CLOCK.U2OS 73 bp overlap

CREBBP 1 dataset

ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 223 bp overlap

CTCF 1 dataset

ChIP GSC23 GSE139416.CTCF.GSC23 139 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF274GAT 303 bp overlap

ChIP BLaER1 ENCFF364PUR 254 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 320 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

EP300 2 datasets

ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 191 bp overlap

ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 245 bp overlap

ERF::FIGLA 1 dataset

Motif DE_60h DE_60h-ERFFIGLA_MA1934.2 13 bp overlap

ESR1 4 datasets

ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 209 bp overlap

ChIP T-47D GSE148277.ESR1.T-47D 339 bp overlap

ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 338 bp overlap

ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 299 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_60h DE_60h-ETV2FIGLA_MA1941.2 13 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 216 bp overlap

FOS 2 datasets

ChIP leiomyoma_PT916 GSE128230.FOS.leiomyoma_PT916 85 bp overlap

ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 57 bp overlap

FOXA1 2 datasets

ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 165 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 728 bp overlap

FOXA2 5 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 221 bp overlap

ChIP DE DE-FOXA2-1 841 bp overlap

ChIP DE DE-FOXA2-1 132 bp overlap

ChIP DE DE-FOXA2-2 1077 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 800 bp overlap

GATA3 2 datasets

ChIP MCF-7 GSE122847.GATA3.MCF-7 200 bp overlap

ChIP T-47D ENCSR000BMX.GATA3.T-47D 166 bp overlap

GATA4 8 datasets

ChIP A-549 GSE85002.GATA4.A-549 193 bp overlap

ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 247 bp overlap

ChIP DE DE-GATA4-1 962 bp overlap

ChIP DE DE-GATA4-2 892 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 317 bp overlap

ChIP foregut GSE117136.GATA4.foregut 786 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 922 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 885 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 842 bp overlap

ChIP DE DE-GATA6-2 754 bp overlap

ChIP foregut GSE117136.GATA6.foregut 838 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 898 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 691 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 798 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

GSPT2 1 dataset

ChIP HEK293T GSE35197.GSPT2.HEK293T 189 bp overlap

HAND2 1 dataset

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 676 bp overlap

HNF1B 1 dataset

ChIP foregut GSE117136.HNF1B.foregut 305 bp overlap

IKZF1 1 dataset

Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap

IKZF2 1 dataset

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

KDM1A 2 datasets

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 690 bp overlap

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 497 bp overlap

MED12 2 datasets

ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 122 bp overlap

ChIP leiomyoma_PT916 GSE128230.MED12.leiomyoma_PT916 123 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MITF 1 dataset

ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 219 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 582 bp overlap

MYF5 1 dataset

Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap

MYOD1 1 dataset

Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap

MYOG 1 dataset

Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap

Msgn1 1 dataset

Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 386 bp overlap

NR3C1 4 datasets

ChIP IMR-90 ERP007093.NR3C1.IMR-90 340 bp overlap

ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 131 bp overlap

ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 200 bp overlap

ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 235 bp overlap

NR3C1_mut 1 dataset

ChIP MCF-7_ICI_Dex GSE81510.NR3C1_mut.MCF-7_ICI_Dex 148 bp overlap

Neurod2 1 dataset

Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap

ONECUT1 2 datasets

ChIP H9 ERP004206.ONECUT1.H9 361 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 702 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

Olig2 1 dataset

Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap

PDX1 3 datasets

ChIP hESC GSE58685.PDX1.hESC 248 bp overlap

ChIP hiPSC GSE125768.PDX1.hiPSC 278 bp overlap

ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 787 bp overlap

PGR 11 datasets

ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 314 bp overlap

ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 264 bp overlap

ChIP T-47D GSE31129.PGR.T-47D 315 bp overlap

ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 301 bp overlap

ChIP T-47D_PG GSE68356.PGR.T-47D_PG 249 bp overlap

ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 516 bp overlap

ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 452 bp overlap

ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 290 bp overlap

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 430 bp overlap

ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 246 bp overlap

ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 480 bp overlap

PHOX2A 1 dataset

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 2 datasets

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 689 bp overlap

Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

POLR2A 3 datasets

ChIP sigmoid colon ENCFF725QFT 221 bp overlap

ChIP sigmoid colon ENCFF748YVT 195 bp overlap

ChIP sigmoid colon ENCFF754JQR 365 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap

Ptf1A 1 dataset

Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap

RAD21 1 dataset

ChIP HAP1 GSE152721.RAD21.HAP1 197 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 89 bp overlap

SIX2 3 datasets

ChIP HEK GSE73865.SIX2.HEK 719 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 594 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 686 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 391 bp overlap

SMARCA4 1 dataset

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 776 bp overlap

SMARCC1 4 datasets

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 774 bp overlap

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 705 bp overlap

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 149 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 164 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 209 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 603 bp overlap

TBL1X 1 dataset

ChIP HEK293T GSE35197.TBL1X.HEK293T 171 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 206 bp overlap

TEAD1 1 dataset

ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 236 bp overlap

TEAD4 3 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 389 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 389 bp overlap

ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 187 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_60h DE_60h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_60h DE_60h-TFAP4FLI1_MA1967.2 14 bp overlap

THAP1 1 dataset

Motif DE_60h DE_60h-THAP1_MA0597.3 8 bp overlap

Tcf12 1 dataset

Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 75 bp overlap

ZNF19 1 dataset

ChIP HEK293T GSE78099.ZNF19.HEK293T 95 bp overlap

ZNF24 1 dataset

ChIP K-562 ENCSR099NCH.ZNF24.K-562 214 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 94 bp overlap

ZNF680 1 dataset

Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap

ZNF766 1 dataset

ChIP HEK293T GSE78099.ZNF766.HEK293T 111 bp overlap