chr6 : 117,613,935 – 117,614,215
280 bp 106 TFs 0 linked genes
This 280 bp open chromatin element has no linked target genes and is bound by 106 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:117,608,935 – 117,619,215
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
ALX3 2 datasets
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
Motif ES_0h ES_0h-ALX3_MA0634.2 6 bp overlap
ARGFX 2 datasets
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
Motif ES_0h ES_0h-ARGFX_MA1463.2 8 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCFF521LQJ 173 bp overlap
Alx4 2 datasets
Motif DE_12h DE_12h-Alx4_MA0853.2 12 bp overlap
Motif ES_0h ES_0h-Alx4_MA0853.2 12 bp overlap
Arid3a 2 datasets
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BRD2 5 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 232 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 182 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 182 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 53 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 268 bp overlap
BRD4 9 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 280 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 126 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 187 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 187 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 231 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 231 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 280 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD4.SUM149PT_DMSO 166 bp overlap
ChIP SUM149_DMSO GSE63581.BRD4.SUM149_DMSO 179 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 136 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 108 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 63 bp overlap
CREBBP 2 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 153 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 153 bp overlap
CTCF 4 datasets
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 193 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 263 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 178 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 193 bp overlap
DRGX 2 datasets
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
Motif ES_0h ES_0h-DRGX_MA1481.2 6 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 280 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
EMX1 2 datasets
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
Motif ES_0h ES_0h-EMX1_MA0612.3 6 bp overlap
EMX2 2 datasets
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
Motif ES_0h ES_0h-EMX2_MA0886.2 6 bp overlap
EN1 2 datasets
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
Motif ES_0h ES_0h-EN1_MA0027.3 6 bp overlap
ESX1 2 datasets
Motif DE_12h DE_12h-ESX1_MA0644.3 7 bp overlap
Motif ES_0h ES_0h-ESX1_MA0644.3 7 bp overlap
ETV5::FOXO1 1 dataset
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
EVX1 2 datasets
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
Motif ES_0h ES_0h-EVX1_MA0887.2 6 bp overlap
EVX2 2 datasets
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
Motif ES_0h ES_0h-EVX2_MA0888.2 6 bp overlap
GRHL1 1 dataset
Motif DE_12h DE_12h-GRHL1_MA0647.2 10 bp overlap
GRHL2 2 datasets
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 112 bp overlap
GSX1 2 datasets
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
Motif ES_0h ES_0h-GSX1_MA0892.2 6 bp overlap
GSX2 2 datasets
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
Motif ES_0h ES_0h-GSX2_MA0893.3 7 bp overlap
HOXA1 2 datasets
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
Motif ES_0h ES_0h-HOXA1_MA1495.2 6 bp overlap
HOXA10 2 datasets
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
Motif ES_0h ES_0h-HOXA10_MA0899.2 9 bp overlap
HOXA2 2 datasets
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
Motif ES_0h ES_0h-HOXA2_MA0900.3 6 bp overlap
HOXA3 2 datasets
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXA5 2 datasets
Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap
Motif ES_0h ES_0h-HOXA5_MA0158.2 8 bp overlap
HOXA6 2 datasets
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
Motif ES_0h ES_0h-HOXA6_MA1497.2 7 bp overlap
HOXB1 2 datasets
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
Motif ES_0h ES_0h-HOXB1_MA2093.1 7 bp overlap
HOXB2 2 datasets
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
Motif ES_0h ES_0h-HOXB2_MA0902.3 6 bp overlap
HOXB3 2 datasets
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
Motif ES_0h ES_0h-HOXB3_MA0903.2 6 bp overlap
HOXB5 2 datasets
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
Motif ES_0h ES_0h-HOXB5_MA0904.3 6 bp overlap
HOXB6 2 datasets
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
Motif ES_0h ES_0h-HOXB6_MA1500.2 7 bp overlap
HOXB7 2 datasets
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
Motif ES_0h ES_0h-HOXB7_MA1501.2 7 bp overlap
HOXB8 2 datasets
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
Motif ES_0h ES_0h-HOXB8_MA1502.2 7 bp overlap
HOXC8 2 datasets
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
Motif ES_0h ES_0h-HOXC8_MA1505.2 6 bp overlap
HOXD3 2 datasets
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
Motif ES_0h ES_0h-HOXD3_MA0912.2 8 bp overlap
HOXD8 2 datasets
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Motif ES_0h ES_0h-HOXD8_MA0910.3 7 bp overlap
HOXD9 2 datasets
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Motif ES_0h ES_0h-HOXD9_MA0913.3 9 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 159 bp overlap
ISX 2 datasets
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
Motif ES_0h ES_0h-ISX_MA0654.2 6 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 266 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 109 bp overlap
KMT2A 2 datasets
ChIP L826 GSE83671.KMT2A.L826 121 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 118 bp overlap
LHX5 2 datasets
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
Motif ES_0h ES_0h-LHX5_MA1519.2 7 bp overlap
LHX6 2 datasets
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
Motif ES_0h ES_0h-LHX6_MA0658.2 8 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 84 bp overlap
LMX1A 2 datasets
Motif DE_12h DE_12h-LMX1A_MA0702.3 7 bp overlap
Motif ES_0h ES_0h-LMX1A_MA0702.3 7 bp overlap
LMX1B 2 datasets
Motif DE_12h DE_12h-LMX1B_MA0703.3 8 bp overlap
Motif ES_0h ES_0h-LMX1B_MA0703.3 8 bp overlap
Lhx3 2 datasets
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
Lhx4 2 datasets
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Motif ES_0h ES_0h-Lhx4_MA0704.2 6 bp overlap
Lhx8 2 datasets
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
Motif ES_0h ES_0h-Lhx8_MA0705.2 6 bp overlap
MEOX1 2 datasets
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
Motif ES_0h ES_0h-MEOX1_MA0661.2 7 bp overlap
MEOX2 2 datasets
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
Motif ES_0h ES_0h-MEOX2_MA0706.2 7 bp overlap
MIXL1 2 datasets
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
Motif ES_0h ES_0h-MIXL1_MA0662.2 6 bp overlap
MNX1 2 datasets
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
Motif ES_0h ES_0h-MNX1_MA0707.3 6 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 215 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 61 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 126 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 189 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 213 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 116 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCFF259FWL 174 bp overlap
NKX6-1 2 datasets
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
Motif ES_0h ES_0h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 2 datasets
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
Motif ES_0h ES_0h-NKX6-2_MA0675.2 6 bp overlap
NOTO 2 datasets
Motif DE_12h DE_12h-NOTO_MA0710.2 7 bp overlap
Motif ES_0h ES_0h-NOTO_MA0710.2 7 bp overlap
Nfat5 2 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
PAX3 2 datasets
Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap
Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap
PDX1 2 datasets
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
Motif ES_0h ES_0h-PDX1_MA0132.3 6 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 243 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 280 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 280 bp overlap
POU6F1 2 datasets
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
Motif ES_0h ES_0h-POU6F1_MA0628.2 6 bp overlap
PRRX1 2 datasets
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
Motif ES_0h ES_0h-PRRX1_MA0716.2 6 bp overlap
Pax7 2 datasets
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 181 bp overlap
RAX2 2 datasets
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
Motif ES_0h ES_0h-RAX2_MA0717.2 6 bp overlap
RELB 4 datasets
Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap
Motif ES_0h ES_0h-RELB_MA1117.2 7 bp overlap
ChIP GM12878 ENCFF217ADF 141 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 52 bp overlap
SHOX 2 datasets
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
Motif ES_0h ES_0h-SHOX_MA0630.2 6 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 158 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 156 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 77 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 163 bp overlap
STAT1::STAT2 1 dataset
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
STAT3 1 dataset
ChIP HCC1937 GSE152203.STAT3.HCC1937 106 bp overlap
Shox2 2 datasets
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Motif ES_0h ES_0h-Shox2_MA0720.2 6 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 71 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 53 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 56 bp overlap
TEAD4 4 datasets
ChIP MKN28 GSE44416.TEAD4.MKN28 144 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 219 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 179 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 280 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 169 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 280 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 212 bp overlap
TLX2 2 datasets
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
Motif ES_0h ES_0h-TLX2_MA1577.2 6 bp overlap
UNCX 2 datasets
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
Motif ES_0h ES_0h-UNCX_MA0721.2 6 bp overlap
VAX1 2 datasets
Motif DE_12h DE_12h-VAX1_MA0722.2 7 bp overlap
Motif ES_0h ES_0h-VAX1_MA0722.2 7 bp overlap
VAX2 2 datasets
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
Motif ES_0h ES_0h-VAX2_MA0723.3 6 bp overlap
VSX1 2 datasets
Motif DE_12h DE_12h-VSX1_MA0725.2 7 bp overlap
Motif ES_0h ES_0h-VSX1_MA0725.2 7 bp overlap
VSX2 2 datasets
Motif DE_12h DE_12h-VSX2_MA0726.2 7 bp overlap
Motif ES_0h ES_0h-VSX2_MA0726.2 7 bp overlap
YY1AP1 3 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 280 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 245 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 187 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 252 bp overlap
ZNF384 1 dataset
ChIP GM12878 ENCFF229VSP 115 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 259 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
mix-a 2 datasets
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap
Motif ES_0h ES_0h-mix-a_MA0621.2 7 bp overlap
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