chr6 : 112,437,073 112,437,540
467 bp 68 TFs 0 linked genes
This 467 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:112,432,073 – 112,442,540
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 248 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 429 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 426 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
EOMES 3 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 142 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 467 bp overlap
ChIP neural cell ENCFF442QNK 159 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 395 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 433 bp overlap
FOSL2 2 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 275 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 314 bp overlap
GATA4 4 datasets
ChIP G296S_4 GSE85628.GATA4.G296S_4 322 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 195 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 176 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 262 bp overlap
GATA6 2 datasets
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 351 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 204 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 218 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 311 bp overlap
HEY2 1 dataset
ChIP hiPSC GSE81585.HEY2.hiPSC 183 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 255 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 382 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 235 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 179 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 264 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 309 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 377 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 215 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 136 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 252 bp overlap
Msgn1 1 dataset
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 445 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 326 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 306 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 257 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 395 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 467 bp overlap
PKNOX1 3 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
ChIP HEK293T ENCFF174WDB 326 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 305 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 327 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 173 bp overlap
RBPJ 3 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 295 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 191 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 144 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 203 bp overlap
SMAD3 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 222 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 387 bp overlap
SMARCA4 6 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 464 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 162 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 397 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 467 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 467 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 284 bp overlap
SMARCC1 5 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 259 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 467 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 119 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 303 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 329 bp overlap
SOX2 6 datasets
ChIP HNSC GSE69479.SOX2.HNSC 405 bp overlap
ChIP NPC GSE122631.SOX2.NPC 206 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 258 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 239 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 212 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 354 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 406 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 231 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 259 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 241 bp overlap
TBR1 2 datasets
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 2 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 2 datasets
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX5 9 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
ChIP G296S GSE85628.TBX5.G296S 467 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 467 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 467 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 438 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 438 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 467 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 467 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 379 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 253 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 193 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 417 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 256 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF777 1 dataset
ChIP HEK293T GSE78099.ZNF777.HEK293T 225 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 151 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 107 bp overlap