chr6 : 94,341,220 – 94,341,495

275 bp 78 TFs 1 linked gene

This 275 bp open chromatin element is linked to ENSG00000220370 and is bound by 78 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000220370		3.2 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

78 transcription factors

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

Atoh1 1 dataset

Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap

BHLHA15 1 dataset

Motif DE_12h DE_12h-BHLHA15_MA0607.2 10 bp overlap

BHLHE22 2 datasets

Motif DE_12h DE_12h-BHLHE22_MA0818.2 10 bp overlap

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BHLHE23 1 dataset

Motif DE_12h DE_12h-BHLHE23_MA0817.2 10 bp overlap

BRF1 1 dataset

ChIP H9 GSE94418.BRF1.H9 136 bp overlap

Bhlha15 1 dataset

Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 244 bp overlap

CTCF 1 dataset

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 208 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ERF::FIGLA 1 dataset

Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

FERD3L 1 dataset

Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap

FLI1 2 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 204 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 142 bp overlap

FOXA1 1 dataset

ChIP liver ERP002306.FOXA1.liver 152 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HDAC2 2 datasets

ChIP H1 ENCFF939VKA 237 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 163 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

MAF 1 dataset

Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 269 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MYF5 1 dataset

Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap

MYF6 1 dataset

Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap

MYOD1 1 dataset

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

MYOG 1 dataset

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

NANOG 7 datasets

ChIP H1 ENCFF747ZPQ 241 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 275 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 206 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 265 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 232 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 272 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 275 bp overlap

NEUROG1 1 dataset

Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap

NHLH2 1 dataset

Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap

NKX2-3 1 dataset

Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap

NKX2-4 1 dataset

Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap

NKX2-8 1 dataset

Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nr2F6 1 dataset

Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap

OLIG1 1 dataset

Motif DE_12h DE_12h-OLIG1_MA0826.1 10 bp overlap

OLIG2 1 dataset

Motif DE_12h DE_12h-OLIG2_MA0678.1 10 bp overlap

OLIG3 1 dataset

Motif DE_12h DE_12h-OLIG3_MA0827.1 10 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 130 bp overlap

PPARG 1 dataset

ChIP HUVEC-C_PPARG_HYPO GSE50144.PPARG.HUVEC-C_PPARG_HYPO 123 bp overlap

Prdm4 1 dataset

Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap

Ptf1A 4 datasets

Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap

Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

RARA 3 datasets

Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 165 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 262 bp overlap

RUNX1 1 dataset

ChIP THP-1 GSE79899.RUNX1.THP-1 239 bp overlap

Rarb 1 dataset

Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap

Rarg 1 dataset

Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap

SOX2 1 dataset

ChIP RENVM GSE49404.SOX2.RENVM 155 bp overlap

SOX8 1 dataset

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 191 bp overlap

SPI1 1 dataset

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 202 bp overlap

STAT3 1 dataset

Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 191 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 259 bp overlap

TAL1::TCF3 1 dataset

Motif DE_12h DE_12h-TAL1TCF3_MA0091.2 10 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 246 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 192 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 262 bp overlap

TCF7L1 1 dataset

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TFAP4 1 dataset

Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

TWIST1 1 dataset

Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 176 bp overlap

ZBTB18 1 dataset

Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF418 1 dataset

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 247 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 230 bp overlap

ZNF667 1 dataset

Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZSCAN21 1 dataset

Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap

Zfp335 3 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap