chr6 : 57,813,319 57,813,959
640 bp 58 TFs 2 linked genes
This 640 bp open chromatin element is linked to ENSG00000272316 and LINC00680 and is bound by 58 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000272316 100.3 kb Distal Multiome
LINC00680 147.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:57,808,319 – 57,818,959
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 357 bp overlap
ATF3 1 dataset
ChIP K562 ENCFF965VXT 237 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 398 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 176 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
ELF1 6 datasets
ChIP GM12878 ENCFF432UGA 259 bp overlap
ChIP HepG2 ENCFF367ZWV 242 bp overlap
ChIP HepG2 ENCFF838BCU 223 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 116 bp overlap
ChIP K562 ENCFF457KVR 306 bp overlap
ChIP K562 ENCFF496AKI 101 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 399 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
FERD3L 1 dataset
Motif ES_0h ES_0h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
GATA2 2 datasets
Motif ES_0h ES_0h-GATA2_MA0036.4 7 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 272 bp overlap
GATA4 1 dataset
Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap
GATA5 1 dataset
Motif ES_0h ES_0h-GATA5_MA0766.3 8 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 189 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 552 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 361 bp overlap
Motif ES_0h ES_0h-GATA6_MA1104.3 8 bp overlap
Gata3 1 dataset
Motif ES_0h ES_0h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
Hnf1A 1 dataset
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 179 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 323 bp overlap
ChIP K562 ENCFF320EQC 409 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 437 bp overlap
NHLH2 1 dataset
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PATZ1 1 dataset
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 311 bp overlap
POLR3A 1 dataset
ChIP K562 ENCFF452GCM 207 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap
REST 1 dataset
ChIP H1 ENCFF429RUE 76 bp overlap
SNAI1 1 dataset
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SP1 1 dataset
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
TBP 10 datasets
ChIP H1 ENCFF859IIO 291 bp overlap
ChIP HBTEC_MOI20_18hpi GSE116772.TBP.HBTEC_MOI20_18hpi 176 bp overlap
ChIP K-562 GSE55306.TBP.K-562 317 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 191 bp overlap
ChIP K562 ENCFF901UYM 381 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 237 bp overlap
ChIP hESC GSE122298.TBP.hESC 220 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 179 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 194 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 164 bp overlap
TCF12 1 dataset
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 3 datasets
ChIP HEK293 ENCFF513JQN 304 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 218 bp overlap
ChIP Panc1 ENCFF829HHL 375 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF265CEM 621 bp overlap
ChIP HEK293 ENCFF265CEM 395 bp overlap
ChIP HEK293 ENCFF582MWI 592 bp overlap
TRPS1 1 dataset
Motif ES_0h ES_0h-TRPS1_MA1970.2 8 bp overlap
TWIST1 1 dataset
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
Wt1 1 dataset
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF24 1 dataset
ChIP K562 ENCFF877JCX 202 bp overlap
ZNF281 1 dataset
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF460 1 dataset
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 151 bp overlap
ZNF677 1 dataset
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap