chr6 : 49,339,145 49,339,500
355 bp 55 TFs 0 linked genes
This 355 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:49,334,145 – 49,344,500
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ARNT2 1 dataset
Motif ES_0h ES_0h-ARNT2_MA1464.2 8 bp overlap
Arnt 1 dataset
Motif ES_0h ES_0h-Arnt_MA0004.1 6 bp overlap
CLOCK 1 dataset
Motif ES_0h ES_0h-CLOCK_MA0819.3 7 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 262 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 161 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 355 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 305 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 253 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 190 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 189 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 331 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 217 bp overlap
LIN54 1 dataset
Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap
MAX 6 datasets
Motif ES_0h ES_0h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 224 bp overlap
ChIP H1 ENCFF914VQY 218 bp overlap
ChIP NB4 ENCFF966MWB 277 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 330 bp overlap
ChIP WTC11 ENCFF223QFY 355 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MLX 1 dataset
Motif ES_0h ES_0h-MLX_MA0663.1 10 bp overlap
MLXIPL 1 dataset
Motif ES_0h ES_0h-MLXIPL_MA0664.2 8 bp overlap
MNT 3 datasets
Motif ES_0h ES_0h-MNT_MA0825.2 6 bp overlap
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 262 bp overlap
ChIP HepG2 ENCFF701PYP 121 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 184 bp overlap
MYC 3 datasets
Motif ES_0h ES_0h-MYC_MA0147.4 8 bp overlap
ChIP H1 ENCFF794ZJT 262 bp overlap
ChIP WA01 ENCSR000EBY.MYC.WA01 133 bp overlap
MYCN 1 dataset
Motif ES_0h ES_0h-MYCN_MA0104.5 8 bp overlap
Mlxip 1 dataset
Motif ES_0h ES_0h-Mlxip_MA0622.2 6 bp overlap
NANOG 4 datasets
ChIP GM23338 ENCFF065NZG 268 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 355 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 272 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 260 bp overlap
NFATC3 1 dataset
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap
Nfat5 2 datasets
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
Npas2 1 dataset
Motif ES_0h ES_0h-Npas2_MA0626.2 8 bp overlap
PAX6 1 dataset
Motif ES_0h ES_0h-PAX6_MA0069.1 14 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 229 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 342 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 206 bp overlap
POU5F1 8 datasets
ChIP GM23338 ENCFF333SNB 286 bp overlap
ChIP H1 ENCFF698ZAP 183 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 355 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 257 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 215 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 189 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 355 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 355 bp overlap
RUVBL2 1 dataset
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 230 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 241 bp overlap
TBP 2 datasets
ChIP hESC GSE122298.TBP.hESC 123 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 95 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 241 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 201 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 229 bp overlap
TFAP4 2 datasets
Motif ES_0h ES_0h-TFAP4_MA1570.1 10 bp overlap
Motif ES_0h ES_0h-TFAP4_MA1570.1 10 bp overlap
TP63 1 dataset
Motif ES_0h ES_0h-TP63_MA0525.2 18 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 83 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 256 bp overlap
ChIP WTC11 ENCFF699QGS 355 bp overlap
USF2 2 datasets
Motif ES_0h ES_0h-USF2_MA0526.5 10 bp overlap
ChIP WTC11 ENCFF139JAW 355 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 269 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 239 bp overlap
Yy1 1 dataset
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZBTB7B 1 dataset
Motif ES_0h ES_0h-ZBTB7B_MA0694.2 10 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 316 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 276 bp overlap
ZNF558 1 dataset
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF582 1 dataset
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF75D 1 dataset
Motif ES_0h ES_0h-ZNF75D_MA1601.2 12 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zfp961 1 dataset
Motif ES_0h ES_0h-Zfp961_MA2126.1 8 bp overlap