chr6 : 13,152,805 13,153,184
379 bp 52 TFs 0 linked genes
This 379 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:13,147,805 – 13,158,184
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 194 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 275 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 111 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 201 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 358 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 238 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 270 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 314 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 274 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 333 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 274 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 323 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 143 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXB9 1 dataset
Motif ES_0h ES_0h-HOXB9_MA1503.2 9 bp overlap
HOXC10 1 dataset
Motif ES_0h ES_0h-HOXC10_MA0905.2 9 bp overlap
HOXC11 1 dataset
Motif ES_0h ES_0h-HOXC11_MA0651.3 11 bp overlap
HOXC13 1 dataset
Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD12 1 dataset
Motif ES_0h ES_0h-HOXD12_MA0873.2 10 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
HSF4 1 dataset
Motif ES_0h ES_0h-HSF4_MA0771.1 13 bp overlap
Hoxa11 1 dataset
Motif ES_0h ES_0h-Hoxa11_MA0911.2 9 bp overlap
JUN 1 dataset
ChIP ESC S24-ESC-d0-JUN-exp1 281 bp overlap
Lef1 1 dataset
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 168 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 168 bp overlap
MYOD1 2 datasets
ChIP myoblast GSE50413.MYOD1.myoblast 141 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 185 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCFF065NZG 232 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 379 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 229 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 315 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 237 bp overlap
ChIP hESC GSE18292.NANOG.hESC 97 bp overlap
NKX6-1 1 dataset
Motif ES_0h ES_0h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 1 dataset
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 274 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 158 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 379 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
POU6F1 1 dataset
Motif ES_0h ES_0h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RUNX1 1 dataset
ChIP 697 GSE138031.RUNX1.697 160 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 379 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 371 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 272 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 362 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 282 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 261 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 361 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 101 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 209 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 245 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 301 bp overlap
TEAD2 1 dataset
Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 379 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 72 bp overlap
YY1 1 dataset
ChIP H1 ENCFF524BTL 289 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 379 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap