chr5 : 152,306,139 – 152,307,232
1,093 bp 80 TFs 1 linked gene
This 1.1 kb open chromatin element is linked to G3BP1 and is bound by 80 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
G3BP1 534.8 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:152,301,139 – 152,312,232
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
ATF2 2 datasets
Motif DE_60h DE_60h-ATF2_MA1632.2 10 bp overlap
Motif DE_72h DE_72h-ATF2_MA1632.2 10 bp overlap
ATF3 2 datasets
Motif DE_60h DE_60h-ATF3_MA0605.3 10 bp overlap
Motif DE_72h DE_72h-ATF3_MA0605.3 10 bp overlap
ATF7 2 datasets
Motif DE_60h DE_60h-ATF7_MA0834.2 10 bp overlap
Motif DE_72h DE_72h-ATF7_MA0834.2 10 bp overlap
BACH2 2 datasets
Motif DE_60h DE_60h-BACH2_MA1470.2 19 bp overlap
Motif DE_72h DE_72h-BACH2_MA1470.2 19 bp overlap
BCL11A 3 datasets
Motif DE_48h DE_48h-BCL11A_MA2324.1 7 bp overlap
Motif DE_60h DE_60h-BCL11A_MA2324.1 7 bp overlap
Motif DE_72h DE_72h-BCL11A_MA2324.1 7 bp overlap
CREB1 2 datasets
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
Motif DE_72h DE_72h-CREB1_MA0018.5 8 bp overlap
CREM 2 datasets
Motif DE_60h DE_60h-CREM_MA0609.3 10 bp overlap
Motif DE_72h DE_72h-CREM_MA0609.3 10 bp overlap
CUX1 1 dataset
Motif DE_60h DE_60h-CUX1_MA0754.3 9 bp overlap
CUX2 1 dataset
Motif DE_60h DE_60h-CUX2_MA0755.2 9 bp overlap
Creb5 2 datasets
Motif DE_60h DE_60h-Creb5_MA0840.2 10 bp overlap
Motif DE_72h DE_72h-Creb5_MA0840.2 10 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DMRTC2 1 dataset
Motif DE_60h DE_60h-DMRTC2_MA1479.2 11 bp overlap
DPRX 2 datasets
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
DUX4 3 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 185 bp overlap
DUXA 2 datasets
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
Dux 5 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EBF1 2 datasets
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
Motif DE_72h DE_72h-EBF1_MA0154.5 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 335 bp overlap
Ebf4 2 datasets
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
Motif DE_72h DE_72h-Ebf4_MA2122.1 11 bp overlap
FIGLA 3 datasets
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOS 2 datasets
Motif DE_60h DE_60h-FOS_MA1951.2 13 bp overlap
Motif DE_72h DE_72h-FOS_MA1951.2 13 bp overlap
FOS::JUN 2 datasets
Motif DE_60h DE_60h-FOSJUN_MA1126.2 10 bp overlap
Motif DE_72h DE_72h-FOSJUN_MA1126.2 10 bp overlap
FOSB::JUN 2 datasets
Motif DE_60h DE_60h-FOSBJUN_MA1127.1 11 bp overlap
Motif DE_72h DE_72h-FOSBJUN_MA1127.1 11 bp overlap
FOSB::JUNB 2 datasets
Motif DE_60h DE_60h-FOSBJUNB_MA1136.1 10 bp overlap
Motif DE_72h DE_72h-FOSBJUNB_MA1136.1 10 bp overlap
FOSL1::JUN 2 datasets
Motif DE_60h DE_60h-FOSL1JUN_MA1129.1 10 bp overlap
Motif DE_72h DE_72h-FOSL1JUN_MA1129.1 10 bp overlap
FOSL2::JUN 2 datasets
Motif DE_60h DE_60h-FOSL2JUN_MA1131.2 10 bp overlap
Motif DE_72h DE_72h-FOSL2JUN_MA1131.2 10 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_60h DE_60h-FOSL2JUNB_MA1139.2 10 bp overlap
Motif DE_72h DE_72h-FOSL2JUNB_MA1139.2 10 bp overlap
FOSL2::JUND 2 datasets
Motif DE_60h DE_60h-FOSL2JUND_MA1145.2 10 bp overlap
Motif DE_72h DE_72h-FOSL2JUND_MA1145.2 10 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 776 bp overlap
ChIP DE DE-FOXA2-2 706 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 868 bp overlap
ChIP DE DE-GATA4-2 968 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 429 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 453 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 861 bp overlap
ChIP DE DE-GATA6-2 897 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 928 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 781 bp overlap
ChIP foregut GSE117136.GATA6.foregut 474 bp overlap
GLIS1 1 dataset
Motif DE_60h DE_60h-GLIS1_MA0735.2 15 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HMBOX1 2 datasets
Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap
Motif DE_72h DE_72h-HMBOX1_MA0895.2 7 bp overlap
JDP2 2 datasets
Motif DE_60h DE_60h-JDP2_MA0656.2 10 bp overlap
Motif DE_72h DE_72h-JDP2_MA0656.2 10 bp overlap
JUN 3 datasets
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
Motif DE_72h DE_72h-JUN_MA0488.2 10 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 439 bp overlap
JUN::JUNB 2 datasets
Motif DE_60h DE_60h-JUNJUNB_MA1133.2 11 bp overlap
Motif DE_72h DE_72h-JUNJUNB_MA1133.2 11 bp overlap
JUNB 2 datasets
Motif DE_60h DE_60h-JUNB_MA1140.3 11 bp overlap
Motif DE_72h DE_72h-JUNB_MA1140.3 11 bp overlap
JUND 2 datasets
Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap
Motif DE_72h DE_72h-JUND_MA0492.2 11 bp overlap
LHX6 3 datasets
Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
Lhx3 2 datasets
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
Motif DE_72h DE_72h-Lhx3_MA0135.2 12 bp overlap
MEIS1 5 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA1639.2 9 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA1639.2 9 bp overlap
MEIS2 2 datasets
Motif DE_60h DE_60h-MEIS2_MA1640.2 9 bp overlap
Motif DE_72h DE_72h-MEIS2_MA1640.2 9 bp overlap
MZF1 3 datasets
Motif DE_48h DE_48h-MZF1_MA0056.3 8 bp overlap
Motif DE_60h DE_60h-MZF1_MA0056.3 8 bp overlap
Motif DE_72h DE_72h-MZF1_MA0056.3 8 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NR2C1 2 datasets
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 2 datasets
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
Nr2e3 1 dataset
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
ONECUT1 2 datasets
Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap
Motif DE_72h DE_72h-ONECUT1_MA0679.3 9 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 249 bp overlap
PBX1 2 datasets
Motif DE_60h DE_60h-PBX1_MA0070.2 9 bp overlap
Motif DE_72h DE_72h-PBX1_MA0070.2 9 bp overlap
PBX2 2 datasets
Motif DE_60h DE_60h-PBX2_MA1113.3 9 bp overlap
Motif DE_72h DE_72h-PBX2_MA1113.3 9 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 223 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 242 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
Pax7 2 datasets
Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 947 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 499 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 700 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 156 bp overlap
SMARCA4 1 dataset
ChIP NSC GSE125033.SMARCA4.NSC 215 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 408 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 682 bp overlap
THRB 2 datasets
Motif DE_60h DE_60h-THRB_MA1576.2 18 bp overlap
Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZEB1 3 datasets
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZNF184 2 datasets
Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap
Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap
ZNF24 1 dataset
Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap
ZNF410 1 dataset
Motif DE_60h DE_60h-ZNF410_MA0752.2 16 bp overlap
ZNF440 1 dataset
ChIP HEK293T GSE78099.ZNF440.HEK293T 54 bp overlap
ZNF558 1 dataset
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
ZSCAN4 1 dataset
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
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