chr5 : 134,427,679 – 134,428,029
350 bp 58 TFs 1 linked gene
This 350 bp open chromatin element is linked to ENSG00000250994 and is bound by 58 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000250994 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:134,422,679 – 134,433,029
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 297 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 350 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 350 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 310 bp overlap
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BIP.BCL11A.WA01 244 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 314 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 253 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 261 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 203 bp overlap
CREB1 4 datasets
ChIP GM23338 ENCFF432ZEW 212 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 152 bp overlap
ChIP H1 ENCFF955PMP 218 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 219 bp overlap
CTCF 1 dataset
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 150 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 190 bp overlap
EHF 1 dataset
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 193 bp overlap
ChIP hESC GSE17917.EP300.hESC 289 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 261 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 256 bp overlap
ETV1 1 dataset
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
Elf5 1 dataset
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 203 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 305 bp overlap
ChIP WTC11 ENCFF338WGC 280 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 230 bp overlap
GABPA 1 dataset
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 82 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 312 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 245 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 291 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 261 bp overlap
KLF4 1 dataset
ChIP WA09 GSE105028.KLF4.WA09 197 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 212 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 284 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 260 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 350 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 350 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 224 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 350 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 350 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 317 bp overlap
ChIP hESC GSE18292.NANOG.hESC 221 bp overlap
ChIP hESC GSE20650.NANOG.hESC 222 bp overlap
NIPBL 1 dataset
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 221 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 190 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 134 bp overlap
ChIP H1 ENCFF566JSR 213 bp overlap
ChIP H1 ENCFF770YBQ 298 bp overlap
POU5F1 19 datasets
ChIP BG03 GSE21614.POU5F1.BG03 225 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 338 bp overlap
ChIP GM23338 ENCFF333SNB 267 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 350 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 350 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 350 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 259 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 241 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 245 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 237 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 279 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 295 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 269 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 350 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 350 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 350 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 276 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 160 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 324 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 350 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 181 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 350 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 200 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 302 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 173 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 139 bp overlap
SMARCA4 4 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 344 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 273 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 348 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 298 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 294 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 254 bp overlap
SMARCC1 4 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 282 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 141 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 340 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 344 bp overlap
SOX2 6 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 264 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 139 bp overlap
ChIP OSvKM GSE81899.SOX2.OSvKM 283 bp overlap
ChIP hESC GSE18292.SOX2.hESC 185 bp overlap
ChIP hESC GSE69479.SOX2.hESC 239 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 328 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 290 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 269 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 139 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 320 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 295 bp overlap
TBP 7 datasets
ChIP H1 ENCFF859IIO 261 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 179 bp overlap
ChIP hESC GSE122298.TBP.hESC 288 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 263 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 313 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 227 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 237 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 157 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 350 bp overlap
TEAD4 2 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 291 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 326 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 143 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 350 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 350 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 320 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 110 bp overlap
ZNF121 3 datasets
ChIP HEK293 ENCFF839FUF 277 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 194 bp overlap
ChIP WTC11 ENCFF291API 173 bp overlap
ZNF143 1 dataset
ChIP WA09 GSE105028.ZNF143.WA09 210 bp overlap
ZNF175 1 dataset
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 247 bp overlap
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