chr5 : 109,532,906 109,533,521
615 bp 56 TFs 0 linked genes
This 615 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:109,527,906 – 109,538,521
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 229 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 357 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 306 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 69 bp overlap
BRD4 4 datasets
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 525 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 98 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 88 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 265 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 259 bp overlap
EP300 3 datasets
ChIP MCF-7 ENCSR000BTR.EP300.MCF-7 146 bp overlap
ChIP SK-N-SH ENCFF451CNG 385 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 223 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 142 bp overlap
ESR1 52 datasets
ChIP MCF-7 GSE128445.ESR1.MCF-7 433 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 278 bp overlap
ChIP MCF-7 GSE95302.ESR1.MCF-7 224 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 222 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 207 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 282 bp overlap
ChIP MCF-7-Luc-Y537S_E2 GSE78284.ESR1.MCF-7-Luc-Y537S_E2 224 bp overlap
ChIP MCF-7-Luc-Y537S_EtOH GSE78284.ESR1.MCF-7-Luc-Y537S_EtOH 273 bp overlap
ChIP MCF-7-Luc_E2 GSE78284.ESR1.MCF-7-Luc_E2 202 bp overlap
ChIP MCF-7L_t0 GSE108787.ESR1.MCF-7L_t0 354 bp overlap
ChIP MCF-7L_t1 GSE108787.ESR1.MCF-7L_t1 327 bp overlap
ChIP MCF-7L_t16 GSE108787.ESR1.MCF-7L_t16 273 bp overlap
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 274 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.ESR1.MCF-7_ARID1A-KO 193 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 274 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 171 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 275 bp overlap
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 169 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 282 bp overlap
ChIP MCF-7_E2 GSE108883.ESR1.MCF-7_E2 235 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 207 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 222 bp overlap
ChIP MCF-7_E2-1280-min-ERalpha GSE94023.ESR1.MCF-7_E2-1280-min-ERalpha 238 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 190 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 167 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 151 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 136 bp overlap
ChIP MCF-7_Fulv GSE117941.ESR1.MCF-7_Fulv 251 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 367 bp overlap
ChIP MCF-7_GDC-0927 GSE117941.ESR1.MCF-7_GDC-0927 338 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 341 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 271 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 263 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 210 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 143 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 222 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 176 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 351 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 394 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 167 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 284 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 299 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 289 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 253 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 339 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 302 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 264 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 405 bp overlap
ChIP MCF-7_shKMT2C GSE100328.ESR1.MCF-7_shKMT2C 214 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 181 bp overlap
ChIP MCF-7_vehicle_4h GSE99626.ESR1.MCF-7_vehicle_4h 197 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 249 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 175 bp overlap
ChIP MCF-7_talen GSE94493.ESR1_Y537N.MCF-7_talen 256 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 236 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 222 bp overlap
FOS 1 dataset
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 113 bp overlap
FOSL2 2 datasets
ChIP SK-N-SH ENCFF127ZDW 285 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 173 bp overlap
FOXA1 5 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 216 bp overlap
ChIP MCF-7_1117 GSE124667.FOXA1.MCF-7_1117 247 bp overlap
ChIP MCF-7_1118 GSE124667.FOXA1.MCF-7_1118 169 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 209 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 209 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 490 bp overlap
ChIP DE DE-FOXA2-2 573 bp overlap
GATA2 6 datasets
ChIP ESF GSE108408.GATA2.ESF 336 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 284 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 273 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 299 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 487 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 350 bp overlap
GATA3 7 datasets
ChIP MCF-7 GSE122847.GATA3.MCF-7 305 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 279 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 221 bp overlap
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 120 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 161 bp overlap
ChIP SK-N-SH ENCFF040SSB 309 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 180 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 366 bp overlap
ChIP DE DE-GATA4-1 615 bp overlap
ChIP DE DE-GATA4-2 599 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 585 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 283 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 483 bp overlap
ChIP DE DE-GATA6-2 615 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 389 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 425 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 372 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 437 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 473 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 460 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 299 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 261 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 172 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 240 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 53 bp overlap
ChIP SK-N-SH ENCFF285GEQ 306 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 299 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 321 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 222 bp overlap
KDM1A 1 dataset
ChIP T-47D-MTVL GSE64467.KDM1A.T-47D-MTVL 216 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 118 bp overlap
MED1 3 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 184 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 184 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 248 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 223 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 133 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 350 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 283 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 274 bp overlap
NFE2L2 1 dataset
ChIP BEAS-2B GSE145834.NFE2L2.BEAS-2B 55 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 357 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 175 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 189 bp overlap
NR3C1 1 dataset
ChIP MCF-7 GSE152203.NR3C1.MCF-7 213 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 173 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 253 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 371 bp overlap
PGR 1 dataset
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 272 bp overlap
PHIP 2 datasets
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 300 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 206 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 441 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 114 bp overlap
SIN3A 4 datasets
ChIP MCF-7 ENCFF521RDC 477 bp overlap
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 218 bp overlap
ChIP SK-N-SH ENCFF931NFD 341 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 136 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 143 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 613 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 378 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 383 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 331 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 462 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 500 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 409 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 263 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 248 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 245 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 338 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 337 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 337 bp overlap
STAT3 1 dataset
ChIP MCF-7 GSE152203.STAT3.MCF-7 233 bp overlap
TCF12 3 datasets
ChIP MCF-7 ENCFF329MRX 417 bp overlap
ChIP MCF-7 ENCSR000BUN.TCF12.MCF-7 261 bp overlap
ChIP SK-N-SH ENCFF147AHB 133 bp overlap
TEAD1 2 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 129 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 301 bp overlap
TEAD4 5 datasets
ChIP MCF-7 ENCFF710WPA 305 bp overlap
ChIP MCF-7 ENCSR000BUO.TEAD4.MCF-7 192 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 338 bp overlap
ChIP SK-N-SH ENCFF754TJT 401 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 225 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 163 bp overlap
ZXDC 1 dataset
ChIP MCF-7 GSE97661.ZXDC.MCF-7 322 bp overlap