chr5 : 106,085,024 106,086,637
1,613 bp 86 TFs 0 linked genes
This 1.6 kb open chromatin element has no linked target genes and is bound by 86 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:106,080,024 – 106,091,637
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 245 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 454 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 231 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 164 bp overlap
Dmbx1 1 dataset
Motif DE_12h DE_12h-Dmbx1_MA0883.2 10 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 170 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 126 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 128 bp overlap
HNF1A 1 dataset
Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap
Hic1 2 datasets
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
Motif ES_0h ES_0h-Hic1_MA0739.2 8 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 290 bp overlap
KLF4 1 dataset
ChIP WA09 GSE105028.KLF4.WA09 236 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Mecom 1 dataset
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
NANOG 20 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCFF065NZG 221 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 327 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 175 bp overlap
ChIP H1 ENCFF747ZPQ 186 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 833 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 529 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 634 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 203 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 306 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 156 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 772 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 387 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 839 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 326 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 532 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 266 bp overlap
ChIP hESC GSE18292.NANOG.hESC 281 bp overlap
ChIP hESC GSE20650.NANOG.hESC 227 bp overlap
ChIP hESC GSE20650.NANOG.hESC 171 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
NFIA 2 datasets
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIX 2 datasets
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NIPBL 3 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 283 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 336 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 291 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Nr2e3 2 datasets
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PBX3 2 datasets
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
PKNOX1 2 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 18 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 709 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 437 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 419 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 258 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 436 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 290 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 171 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 434 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 240 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 278 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 123 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 220 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 530 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 251 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 202 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
PPARD 2 datasets
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Motif ES_0h ES_0h-PPARD_MA1550.2 14 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 239 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 264 bp overlap
RXRB 2 datasets
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
Motif ES_0h ES_0h-RXRB_MA0855.1 14 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 370 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 271 bp overlap
SMARCA4 6 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 379 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 262 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 394 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 269 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 609 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 317 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 430 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 224 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 465 bp overlap
SMARCC1 4 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 379 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 198 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 1018 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 285 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 230 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 257 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 440 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 201 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 363 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Six3 1 dataset
Motif DE_12h DE_12h-Six3_MA0631.2 11 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 277 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif ES_0h ES_0h-Tbx6_MA1567.3 9 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 252 bp overlap
ZBTB7C 1 dataset
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF24 2 datasets
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF324 3 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF677 2 datasets
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap