chr5 : 102,974,256 102,974,505
249 bp 65 TFs 0 linked genes
This 249 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:102,969,256 – 102,979,505
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 150 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 176 bp overlap
CREBBP 2 datasets
ChIP LS180_125 GSE39277.CREBBP.LS180_125 81 bp overlap
ChIP MCF-7 ERP000901.CREBBP.MCF-7 52 bp overlap
CTCF 81 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 138 bp overlap
ChIP C4-2B ENCFF821XVN 249 bp overlap
ChIP Caco-2 ENCFF753NZV 249 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 102 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 137 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 195 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 179 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 174 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 249 bp overlap
ChIP GM23338 ENCFF531QOI 249 bp overlap
ChIP GM23338 ENCFF772DML 100 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 249 bp overlap
ChIP H9 ENCFF152GTF 242 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 249 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 178 bp overlap
ChIP HCT116 ENCFF003KHP 249 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 249 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 249 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 220 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 217 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 134 bp overlap
ChIP HepG2 ENCFF348BUL 193 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 199 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 152 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 221 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 96 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 215 bp overlap
ChIP MCF-7 ENCFF162GNE 105 bp overlap
ChIP MCF-7 ENCFF198DQX 227 bp overlap
ChIP MCF-7 ENCFF210JUZ 123 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 227 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 249 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 207 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 180 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 177 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 191 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 130 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 249 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 249 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 245 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 209 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 103 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 120 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 116 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 249 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 246 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 249 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 141 bp overlap
ChIP PC-3 ENCFF487TUI 249 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 249 bp overlap
ChIP RWPE2 ENCFF911IEE 249 bp overlap
ChIP RWPE2 ENCFF911IEE 249 bp overlap
ChIP VCaP ENCFF858YQT 187 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 249 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 143 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 184 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 125 bp overlap
ChIP endodermal cell ENCFF471YCZ 244 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 183 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 249 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 173 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 143 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 133 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 211 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 190 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 145 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 157 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTC2 1 dataset
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 217 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 223 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 217 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 193 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 223 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 204 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 199 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 185 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 227 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 218 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 113 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 166 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 81 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 249 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 122 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 209 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 249 bp overlap
HNF4A 1 dataset
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
HOXB4 2 datasets
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 133 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PAX6 1 dataset
Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap
POU6F1 2 datasets
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RAD21 15 datasets
ChIP H1 ENCFF698EWO 71 bp overlap
ChIP H1 ENCFF967OJF 230 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 249 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 134 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 147 bp overlap
ChIP K562 ENCFF634XYR 249 bp overlap
ChIP MCF-7 ENCFF694KOM 249 bp overlap
ChIP MCF-7 ENCFF724VCQ 120 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 249 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 236 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 215 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 149 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 155 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 211 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 131 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
Rhox11 2 datasets
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
SCRT1 1 dataset
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 127 bp overlap
SMC1A 3 datasets
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 168 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 239 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 148 bp overlap
SMC3 4 datasets
ChIP HeLa GSE126990.SMC3.HeLa 197 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 197 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 197 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 221 bp overlap
STAG1 1 dataset
ChIP MCF-7 ERP000209.STAG1.MCF-7 165 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 212 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF143 2 datasets
ChIP HeLa GSE39263.ZNF143.HeLa 124 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 226 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap