chr5 : 89,849,726 – 89,850,116

390 bp 58 TFs 0 linked genes

This 390 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 124 bp overlap

ASH2L 1 dataset

ChIP GM12878 ENCFF143PXG 295 bp overlap

CASZ1 1 dataset

ChIP rhabdomyosarcoma_Ctrl GSE126142.CASZ1.rhabdomyosarcoma_Ctrl 236 bp overlap

CREBBP 1 dataset

ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 311 bp overlap

CTCF 1 dataset

ChIP endodermal cell ENCFF471YCZ 265 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF274GAT 251 bp overlap

ChIP BLaER1 ENCFF896HSY 163 bp overlap

ESR1 2 datasets

ChIP MCF-7_LTED GSE86538.ESR1.MCF-7_LTED 189 bp overlap

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 223 bp overlap

FOXC1 1 dataset

Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap

FOXC2 1 dataset

Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

MED1 1 dataset

ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 164 bp overlap

MEF2B 1 dataset

ChIP tonsil GSE110682.MEF2B.tonsil 390 bp overlap

MTF1 1 dataset

Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap

MYB 3 datasets

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap

MYOD1 1 dataset

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 237 bp overlap

NR2C1 2 datasets

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap

NR2C2 2 datasets

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap

NR2F1 2 datasets

Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap

Motif ES_0h ES_0h-NR2F1_MA0017.3 12 bp overlap

Nr1H2 2 datasets

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 2 datasets

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 2 datasets

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap

Nr1h3::Rxra 2 datasets

Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap

Motif ES_0h ES_0h-Nr1h3Rxra_MA0494.2 16 bp overlap

POU1F1 2 datasets

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap

POU2F1 2 datasets

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F2 2 datasets

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap

POU3F1 2 datasets

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F4 2 datasets

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU5F1 3 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 187 bp overlap

POU5F1B 2 datasets

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

RARA::RXRA 2 datasets

Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap

Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap

RARA::RXRG 2 datasets

Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap

Motif ES_0h ES_0h-RARARXRG_MA1149.2 17 bp overlap

RORB 2 datasets

Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap

Motif ES_0h ES_0h-RORB_MA1150.2 10 bp overlap

Rarg 2 datasets

Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap

Motif ES_0h ES_0h-Rarg_MA0860.1 17 bp overlap

SIX1 2 datasets

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap

SIX2 2 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap

SMARCA2 1 dataset

ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 79 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 89 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

SREBF2 2 datasets

Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap

Motif ES_0h ES_0h-SREBF2_MA0596.1 10 bp overlap

Six4 2 datasets

Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap

Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap

TEAD4 1 dataset

ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap

TFAP2A 5 datasets

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap

Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap

Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap

ChIP WA09 GSE105081.TFAP2A.WA09 161 bp overlap

TFAP2C 2 datasets

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap

THRA 4 datasets

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap

THRB 2 datasets

Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap

Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 213 bp overlap

ZBTB24 1 dataset

ChIP HCT-116 GSE111683.ZBTB24.HCT-116 109 bp overlap

ZNF189 1 dataset

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

ZNF341 1 dataset

Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap

ZNF449 1 dataset

Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap

ZNF558 2 datasets

Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap

Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap

ZNF582 2 datasets

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap

Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap

ZNF682 2 datasets

Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap

Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap

ZNF766 1 dataset

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap