chr5 : 29,150,466 – 29,151,184
718 bp 73 TFs 0 linked genes
This 718 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:29,145,466 – 29,156,184
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 12 datasets
ChIP LNCaP GSE110655.AR.LNCaP 241 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 229 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 252 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 275 bp overlap
ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 265 bp overlap
ChIP LNCaP_F266S_shFOXA1_Ethanol GSE128883.AR.LNCaP_F266S_shFOXA1_Ethanol 178 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 233 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 186 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 285 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 221 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 168 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 341 bp overlap
ARID1A 1 dataset
ChIP LNCaP GSE94682.ARID1A.LNCaP 187 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 313 bp overlap
COBLL1 1 dataset
ChIP LTAD_EtOH GSE94577.COBLL1.LTAD_EtOH 292 bp overlap
CTCF 1 dataset
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 215 bp overlap
DDX21 1 dataset
ChIP A-375 GSE128080.DDX21.A-375 137 bp overlap
DMRT3 1 dataset
Motif DE_12h DE_12h-DMRT3_MA0610.2 7 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 326 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 177 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
FLI1::DRGX 2 datasets
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
Motif ES_0h ES_0h-FLI1DRGX_MA1949.2 14 bp overlap
FOXA1 2 datasets
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 251 bp overlap
ChIP prostate_2030 GSE130408.FOXA1.prostate_2030 247 bp overlap
HIF1A 2 datasets
ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 170 bp overlap
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 206 bp overlap
HOXA3 2 datasets
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXA4 2 datasets
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
Motif ES_0h ES_0h-HOXA4_MA1496.2 7 bp overlap
HOXB13 24 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 139 bp overlap
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 365 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 183 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 255 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 169 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 218 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 353 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 377 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 346 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 236 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 194 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 213 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 285 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 333 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 235 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 280 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 164 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 203 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 317 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 287 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 278 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 554 bp overlap
ChIP prostate_P7 GSE130408.HOXB13.prostate_P7 221 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 274 bp overlap
HOXB4 2 datasets
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
IRF2 1 dataset
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 85 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
MZF1 2 datasets
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 530 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 287 bp overlap
NKX6-1 2 datasets
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
Motif ES_0h ES_0h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 2 datasets
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
NR2C1 4 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
ChIP K-562 ENCSR178DEG.NR2C1.K-562 185 bp overlap
ChIP K562 ENCFF568JLK 310 bp overlap
NR2C2 4 datasets
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
ChIP HeLa-S3 ENCFF796ZSS 325 bp overlap
ChIP HeLa-S3 ENCFF796ZSS 224 bp overlap
NR2F1 4 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif DE_12h DE_12h-NR2F1_MA1538.1 15 bp overlap
Motif ES_0h ES_0h-NR2F1_MA0017.3 12 bp overlap
Motif ES_0h ES_0h-NR2F1_MA1538.1 15 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 539 bp overlap
Nr1H2 2 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif ES_0h ES_0h-Nr2F6_MA0728.1 15 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 371 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 99 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 308 bp overlap
POU5F1 4 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 702 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 172 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 127 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 349 bp overlap
Pgr 2 datasets
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap
RELB 2 datasets
Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap
Motif ES_0h ES_0h-RELB_MA1117.2 7 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
Rhox11 2 datasets
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SIX5 2 datasets
ChIP H1 ENCFF942SOJ 229 bp overlap
ChIP WA01 ENCSR000BIQ.SIX5.WA01 208 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 427 bp overlap
SPIC 2 datasets
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Motif ES_0h ES_0h-SPIC_MA0687.2 13 bp overlap
Six3 1 dataset
Motif DE_12h DE_12h-Six3_MA0631.2 11 bp overlap
Stat5a::Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 110 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 348 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 332 bp overlap
Thap11 2 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 395 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 103 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 164 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 166 bp overlap
ZNF143 4 datasets
ChIP WA01 ENCSR000EBW.ZNF143.WA01 288 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 355 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 299 bp overlap
ChIP WTC11 ENCFF249JUK 350 bp overlap
ZNF175 2 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF189 2 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 82 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zfp335 4 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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